Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Msh2P43247 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh2P43247 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh2P43247 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Msh2P43247 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Msh2P43247 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh2P43247 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh2P43247 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh2P43247 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Msh2P43247 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Msh2P43247 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Msh2P43247 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.69□□□□□ -0.06
Msh2P43247 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh2P43247 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh2P43247 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh2P43247 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Msh2P43247 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Msh2P43247 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh2P43247 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh2P43247 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh2P43247 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh2P43247 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh2P43247 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh2P43247 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh2P43247 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh2P43247 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Msh2P43247 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.69□□□□□ -0.06
Msh2P43247 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh2P43247 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Msh2P43247 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Msh2P43247 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh2P43247 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh2P43247 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Msh2P43247 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh2P43247 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh2P43247 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Msh2P43247 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.68□□□□□ -0.06
Msh2P43247 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.68□□□□□ -0.06
Msh2P43247 Gm9385-201ENSMUST00000117563 472 ntBASIC14.68□□□□□ -0.06
Msh2P43247 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.68□□□□□ -0.06
Msh2P43247 Gm25911-201ENSMUST00000157621 56 ntBASIC14.68□□□□□ -0.06
Msh2P43247 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh2P43247 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.68□□□□□ -0.06
Msh2P43247 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh2P43247 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh2P43247 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Msh2P43247 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh2P43247 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh2P43247 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Msh2P43247 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Msh2P43247 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.68□□□□□ -0.06
Msh2P43247 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Msh2P43247 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh2P43247 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh2P43247 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Msh2P43247 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Msh2P43247 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Msh2P43247 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.67□□□□□ -0.06
Msh2P43247 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.67□□□□□ -0.06
Msh2P43247 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.67□□□□□ -0.06
Msh2P43247 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Msh2P43247 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Gm15427-201ENSMUST00000117288 531 ntBASIC14.67□□□□□ -0.06
Msh2P43247 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.67□□□□□ -0.06
Msh2P43247 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.67□□□□□ -0.06
Msh2P43247 Gm2213-201ENSMUST00000197485 688 ntBASIC14.67□□□□□ -0.06
Msh2P43247 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.67□□□□□ -0.06
Msh2P43247 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.67□□□□□ -0.06
Msh2P43247 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Msh2P43247 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Msh2P43247 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Msh2P43247 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Msh2P43247 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
Msh2P43247 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh2P43247 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Msh2P43247 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.66□□□□□ -0.06
Msh2P43247 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Msh2P43247 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms