Protein–RNA interactions for Protein: P33622

Apoc3, Apolipoprotein C-III, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoc3P33622 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Apoc3P33622 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Apoc3P33622 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Apoc3P33622 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Apoc3P33622 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Apoc3P33622 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Apoc3P33622 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Apoc3P33622 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Apoc3P33622 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.06□□□□□ -0.48
Apoc3P33622 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Apoc3P33622 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Apoc3P33622 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Apoc3P33622 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Apoc3P33622 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Apoc3P33622 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.06□□□□□ -0.48
Apoc3P33622 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Apoc3P33622 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.06□□□□□ -0.48
Apoc3P33622 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.06□□□□□ -0.48
Apoc3P33622 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Apoc3P33622 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Apoc3P33622 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Apoc3P33622 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Apoc3P33622 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Apoc3P33622 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Apoc3P33622 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Apoc3P33622 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Apoc3P33622 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Apoc3P33622 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Apoc3P33622 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Apoc3P33622 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.05□□□□□ -0.48
Apoc3P33622 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Apoc3P33622 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Apoc3P33622 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.05□□□□□ -0.48
Apoc3P33622 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
Apoc3P33622 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Apoc3P33622 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Apoc3P33622 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Apoc3P33622 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Apoc3P33622 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Apoc3P33622 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Apoc3P33622 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Apoc3P33622 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Apoc3P33622 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Apoc3P33622 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Apoc3P33622 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Apoc3P33622 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.05□□□□□ -0.48
Apoc3P33622 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.05□□□□□ -0.48
Apoc3P33622 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Apoc3P33622 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.05□□□□□ -0.48
Apoc3P33622 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Apoc3P33622 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Apoc3P33622 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Apoc3P33622 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Apoc3P33622 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Apoc3P33622 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Apoc3P33622 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Apoc3P33622 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Apoc3P33622 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Apoc3P33622 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.05□□□□□ -0.48
Apoc3P33622 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Apoc3P33622 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Apoc3P33622 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.04□□□□□ -0.48
Apoc3P33622 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Apoc3P33622 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.04□□□□□ -0.48
Apoc3P33622 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Apoc3P33622 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Apoc3P33622 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Apoc3P33622 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Apoc3P33622 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC12.04□□□□□ -0.48
Apoc3P33622 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.04□□□□□ -0.48
Apoc3P33622 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.04□□□□□ -0.48
Apoc3P33622 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.04□□□□□ -0.48
Apoc3P33622 Gm19164-201ENSMUST00000210667 640 ntBASIC12.04□□□□□ -0.48
Apoc3P33622 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Apoc3P33622 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Apoc3P33622 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Apoc3P33622 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms