Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nedd8P29595 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nedd8P29595 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.16□□□□□ -0.3
Nedd8P29595 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Gm9726-201ENSMUST00000180321 678 ntBASIC13.16□□□□□ -0.3
Nedd8P29595 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.16□□□□□ -0.3
Nedd8P29595 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nedd8P29595 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.16□□□□□ -0.3
Nedd8P29595 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.16□□□□□ -0.3
Nedd8P29595 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nedd8P29595 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.16□□□□□ -0.3
Nedd8P29595 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nedd8P29595 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Nedd8P29595 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.15□□□□□ -0.3
Nedd8P29595 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nedd8P29595 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nedd8P29595 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Nedd8P29595 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.15□□□□□ -0.3
Nedd8P29595 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.15□□□□□ -0.3
Nedd8P29595 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.15□□□□□ -0.3
Nedd8P29595 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.15□□□□□ -0.3
Nedd8P29595 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nedd8P29595 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nedd8P29595 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nedd8P29595 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nedd8P29595 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nedd8P29595 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Nedd8P29595 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nedd8P29595 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.14□□□□□ -0.31
Nedd8P29595 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nedd8P29595 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nedd8P29595 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nedd8P29595 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nedd8P29595 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nedd8P29595 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nedd8P29595 Gm4459-201ENSMUST00000118750 468 ntBASIC13.14□□□□□ -0.31
Nedd8P29595 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Nedd8P29595 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nedd8P29595 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.14□□□□□ -0.31
Nedd8P29595 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.14□□□□□ -0.31
Nedd8P29595 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nedd8P29595 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nedd8P29595 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.14□□□□□ -0.31
Nedd8P29595 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nedd8P29595 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nedd8P29595 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nedd8P29595 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nedd8P29595 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nedd8P29595 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nedd8P29595 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nedd8P29595 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nedd8P29595 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nedd8P29595 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nedd8P29595 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.14□□□□□ -0.31
Nedd8P29595 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nedd8P29595 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms