Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Col8a2P25318 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col8a2P25318 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col8a2P25318 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col8a2P25318 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.9□□□□□ -0.5
Col8a2P25318 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col8a2P25318 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col8a2P25318 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col8a2P25318 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col8a2P25318 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col8a2P25318 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col8a2P25318 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col8a2P25318 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col8a2P25318 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.9□□□□□ -0.51
Col8a2P25318 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col8a2P25318 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col8a2P25318 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col8a2P25318 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Col8a2P25318 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.89□□□□□ -0.51
Col8a2P25318 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Col8a2P25318 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Col8a2P25318 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.89□□□□□ -0.51
Col8a2P25318 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.89□□□□□ -0.51
Col8a2P25318 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.89□□□□□ -0.51
Col8a2P25318 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Col8a2P25318 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Col8a2P25318 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.89□□□□□ -0.51
Col8a2P25318 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.89□□□□□ -0.51
Col8a2P25318 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Col8a2P25318 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Col8a2P25318 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.89□□□□□ -0.51
Col8a2P25318 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Col8a2P25318 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Col8a2P25318 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.89□□□□□ -0.51
Col8a2P25318 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col8a2P25318 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Col8a2P25318 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Col8a2P25318 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Col8a2P25318 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.88□□□□□ -0.51
Col8a2P25318 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.88□□□□□ -0.51
Col8a2P25318 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.88□□□□□ -0.51
Col8a2P25318 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Col8a2P25318 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.88□□□□□ -0.51
Col8a2P25318 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Gm9522-201ENSMUST00000182394 926 ntBASIC11.88□□□□□ -0.51
Col8a2P25318 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Col8a2P25318 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Col8a2P25318 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.88□□□□□ -0.51
Col8a2P25318 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.88□□□□□ -0.51
Col8a2P25318 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.88□□□□□ -0.51
Col8a2P25318 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Col8a2P25318 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col8a2P25318 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms