Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.3□□□□□ -0.28
Sod1P08228 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.3□□□□□ -0.28
Sod1P08228 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Sod1P08228 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Sod1P08228 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.3□□□□□ -0.28
Sod1P08228 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.29□□□□□ -0.28
Sod1P08228 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sod1P08228 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.29□□□□□ -0.28
Sod1P08228 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Gm45784-201ENSMUST00000188360 142 ntBASIC13.29□□□□□ -0.28
Sod1P08228 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.29□□□□□ -0.28
Sod1P08228 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.29□□□□□ -0.28
Sod1P08228 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.29□□□□□ -0.28
Sod1P08228 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Sod1P08228 Gm6091-201ENSMUST00000098307 165 ntBASIC13.29□□□□□ -0.28
Sod1P08228 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Sod1P08228 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
Sod1P08228 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.29□□□□□ -0.28
Sod1P08228 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.29□□□□□ -0.28
Sod1P08228 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Sod1P08228 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sod1P08228 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sod1P08228 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sod1P08228 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Sod1P08228 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sod1P08228 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sod1P08228 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sod1P08228 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sod1P08228 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sod1P08228 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sod1P08228 Gm14660-201ENSMUST00000119809 575 ntBASIC13.28□□□□□ -0.28
Sod1P08228 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sod1P08228 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sod1P08228 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.28□□□□□ -0.28
Sod1P08228 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sod1P08228 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.28□□□□□ -0.28
Sod1P08228 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sod1P08228 Gm10012-201ENSMUST00000078252 192 ntBASIC13.28□□□□□ -0.28
Sod1P08228 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.28□□□□□ -0.28
Sod1P08228 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Sod1P08228 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sod1P08228 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.28□□□□□ -0.28
Sod1P08228 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.28□□□□□ -0.28
Sod1P08228 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sod1P08228 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sod1P08228 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sod1P08228 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sod1P08228 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sod1P08228 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sod1P08228 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sod1P08228 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sod1P08228 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sod1P08228 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sod1P08228 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.27□□□□□ -0.29
Sod1P08228 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.27□□□□□ -0.29
Sod1P08228 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sod1P08228 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.27□□□□□ -0.29
Sod1P08228 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sod1P08228 Snora78-201ENSMUST00000158630 128 ntBASIC13.27□□□□□ -0.29
Sod1P08228 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sod1P08228 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sod1P08228 Gm24196-201ENSMUST00000179161 110 ntBASIC13.27□□□□□ -0.29
Sod1P08228 Gm29127-201ENSMUST00000188304 517 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms