Protein–RNA interactions for Protein: P06728

Apoa4, Apolipoprotein A-IV, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa4P06728 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Apoa4P06728 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Apoa4P06728 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Apoa4P06728 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Apoa4P06728 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Apoa4P06728 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Apoa4P06728 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Apoa4P06728 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Apoa4P06728 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Apoa4P06728 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Apoa4P06728 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Apoa4P06728 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Apoa4P06728 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Apoa4P06728 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Apoa4P06728 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Apoa4P06728 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.02□□□□□ -0.17
Apoa4P06728 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Apoa4P06728 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.02□□□□□ -0.17
Apoa4P06728 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Apoa4P06728 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Apoa4P06728 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.02□□□□□ -0.17
Apoa4P06728 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.02□□□□□ -0.17
Apoa4P06728 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.02□□□□□ -0.17
Apoa4P06728 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.02□□□□□ -0.17
Apoa4P06728 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Apoa4P06728 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Apoa4P06728 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Apoa4P06728 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Apoa4P06728 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Apoa4P06728 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Apoa4P06728 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Apoa4P06728 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Apoa4P06728 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Apoa4P06728 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Apoa4P06728 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoa4P06728 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoa4P06728 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoa4P06728 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoa4P06728 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoa4P06728 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoa4P06728 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoa4P06728 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
Apoa4P06728 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoa4P06728 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoa4P06728 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.01□□□□□ -0.17
Apoa4P06728 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoa4P06728 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Apoa4P06728 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Apoa4P06728 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.01□□□□□ -0.17
Apoa4P06728 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Apoa4P06728 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Apoa4P06728 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoa4P06728 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoa4P06728 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoa4P06728 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoa4P06728 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoa4P06728 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoa4P06728 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Apoa4P06728 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Apoa4P06728 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Apoa4P06728 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Apoa4P06728 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.01□□□□□ -0.17
Apoa4P06728 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Apoa4P06728 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Apoa4P06728 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Apoa4P06728 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Apoa4P06728 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Apoa4P06728 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Apoa4P06728 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Apoa4P06728 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Apoa4P06728 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Apoa4P06728 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Apoa4P06728 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Apoa4P06728 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14□□□□□ -0.17
Apoa4P06728 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Apoa4P06728 Gm18206-201ENSMUST00000207027 926 ntBASIC14□□□□□ -0.17
Apoa4P06728 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Apoa4P06728 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14□□□□□ -0.17
Apoa4P06728 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Apoa4P06728 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Apoa4P06728 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Apoa4P06728 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Apoa4P06728 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Apoa4P06728 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14□□□□□ -0.17
Apoa4P06728 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14□□□□□ -0.17
Apoa4P06728 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Apoa4P06728 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14□□□□□ -0.17
Apoa4P06728 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Apoa4P06728 Gm38102-201ENSMUST00000192791 1935 ntBASIC14□□□□□ -0.17
Apoa4P06728 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Apoa4P06728 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Apoa4P06728 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Apoa4P06728 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Apoa4P06728 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Apoa4P06728 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Apoa4P06728 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Apoa4P06728 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Apoa4P06728 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Apoa4P06728 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Apoa4P06728 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms