Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TcraP01849 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC10.41□□□□□ -0.74
TcraP01849 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
TcraP01849 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.41□□□□□ -0.74
TcraP01849 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
TcraP01849 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC10.41□□□□□ -0.74
TcraP01849 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
TcraP01849 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC10.41□□□□□ -0.74
TcraP01849 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC10.41□□□□□ -0.74
TcraP01849 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC10.41□□□□□ -0.74
TcraP01849 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
TcraP01849 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
TcraP01849 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
TcraP01849 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC10.41□□□□□ -0.74
TcraP01849 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
TcraP01849 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC10.41□□□□□ -0.74
TcraP01849 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC10.41□□□□□ -0.74
TcraP01849 Otx2os1-206ENSMUST00000228153 787 ntBASIC10.41□□□□□ -0.74
TcraP01849 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
TcraP01849 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC10.41□□□□□ -0.74
TcraP01849 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
TcraP01849 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
TcraP01849 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC10.41□□□□□ -0.74
TcraP01849 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
TcraP01849 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
TcraP01849 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TcraP01849 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.41□□□□□ -0.74
TcraP01849 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC10.4□□□□□ -0.74
TcraP01849 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC10.4□□□□□ -0.74
TcraP01849 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
TcraP01849 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
TcraP01849 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
TcraP01849 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 Gm18244-201ENSMUST00000219747 1566 ntBASIC10.4□□□□□ -0.74
TcraP01849 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
TcraP01849 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
TcraP01849 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC10.4□□□□□ -0.74
TcraP01849 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC10.4□□□□□ -0.74
TcraP01849 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
TcraP01849 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
TcraP01849 Gm25745-201ENSMUST00000174945 133 ntBASIC10.4□□□□□ -0.74
TcraP01849 Gm8318-201ENSMUST00000182954 872 ntBASIC10.4□□□□□ -0.74
TcraP01849 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC10.4□□□□□ -0.74
TcraP01849 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 AC158538.2-201ENSMUST00000225455 906 ntBASIC10.4□□□□□ -0.74
TcraP01849 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
TcraP01849 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
TcraP01849 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.4□□□□□ -0.74
TcraP01849 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
TcraP01849 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
TcraP01849 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
TcraP01849 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
TcraP01849 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
TcraP01849 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms