Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC18.28■□□□□ 0.52
Nid2O88322 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC18.28■□□□□ 0.52
Nid2O88322 Gm29608-201ENSMUST00000190444 463 ntBASIC18.28■□□□□ 0.52
Nid2O88322 Gm42550-201ENSMUST00000201553 960 ntBASIC18.28■□□□□ 0.52
Nid2O88322 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC18.28■□□□□ 0.52
Nid2O88322 Gm7783-201ENSMUST00000204795 781 ntBASIC18.28■□□□□ 0.52
Nid2O88322 Gm18934-201ENSMUST00000216671 1044 ntBASIC18.28■□□□□ 0.52
Nid2O88322 Gm17823-201ENSMUST00000217830 1006 ntBASIC18.28■□□□□ 0.52
Nid2O88322 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nid2O88322 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nid2O88322 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nid2O88322 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nid2O88322 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nid2O88322 Gm24447-201ENSMUST00000083977 338 ntBASIC18.28■□□□□ 0.52
Nid2O88322 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Nid2O88322 AC121801.1-201ENSMUST00000225363 1899 ntBASIC18.28■□□□□ 0.52
Nid2O88322 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
Nid2O88322 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nid2O88322 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nid2O88322 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nid2O88322 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nid2O88322 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Nid2O88322 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Nid2O88322 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nid2O88322 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nid2O88322 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nid2O88322 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nid2O88322 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nid2O88322 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nid2O88322 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC18.27■□□□□ 0.52
Nid2O88322 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nid2O88322 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nid2O88322 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC18.27■□□□□ 0.52
Nid2O88322 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Nid2O88322 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Nid2O88322 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC18.27■□□□□ 0.52
Nid2O88322 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC18.27■□□□□ 0.52
Nid2O88322 Gm18056-201ENSMUST00000207670 568 ntBASIC18.27■□□□□ 0.52
Nid2O88322 Gm18061-201ENSMUST00000208350 562 ntBASIC18.27■□□□□ 0.52
Nid2O88322 Gm18063-201ENSMUST00000208529 568 ntBASIC18.27■□□□□ 0.52
Nid2O88322 Gm18052-201ENSMUST00000208750 559 ntBASIC18.27■□□□□ 0.52
Nid2O88322 AC140406.1-201ENSMUST00000226481 465 ntBASIC18.27■□□□□ 0.52
Nid2O88322 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nid2O88322 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nid2O88322 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nid2O88322 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nid2O88322 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nid2O88322 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nid2O88322 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.27■□□□□ 0.52
Nid2O88322 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nid2O88322 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC18.27■□□□□ 0.52
Nid2O88322 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC18.27■□□□□ 0.52
Nid2O88322 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nid2O88322 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nid2O88322 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC18.27■□□□□ 0.51
Nid2O88322 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Nid2O88322 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.27■□□□□ 0.51
Nid2O88322 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nid2O88322 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC18.27■□□□□ 0.51
Nid2O88322 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.27■□□□□ 0.51
Nid2O88322 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.27■□□□□ 0.51
Nid2O88322 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nid2O88322 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nid2O88322 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nid2O88322 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Nid2O88322 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nid2O88322 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.27■□□□□ 0.51
Nid2O88322 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Nid2O88322 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Nid2O88322 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Nid2O88322 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Nid2O88322 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC18.26■□□□□ 0.51
Nid2O88322 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC18.26■□□□□ 0.51
Nid2O88322 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 Gm43758-201ENSMUST00000199500 367 ntBASIC18.26■□□□□ 0.51
Nid2O88322 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC18.26■□□□□ 0.51
Nid2O88322 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC18.26■□□□□ 0.51
Nid2O88322 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC18.26■□□□□ 0.51
Nid2O88322 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nid2O88322 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms