Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc1a6O35544 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.05□□□□□ -0.16
Slc1a6O35544 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Slc1a6O35544 Gm13036-201ENSMUST00000117799 748 ntBASIC14.05□□□□□ -0.16
Slc1a6O35544 Gm5479-201ENSMUST00000160578 435 ntBASIC14.05□□□□□ -0.16
Slc1a6O35544 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc1a6O35544 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.05□□□□□ -0.16
Slc1a6O35544 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.05□□□□□ -0.16
Slc1a6O35544 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Slc1a6O35544 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.05□□□□□ -0.16
Slc1a6O35544 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc1a6O35544 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc1a6O35544 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc1a6O35544 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc1a6O35544 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Slc1a6O35544 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc1a6O35544 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Slc1a6O35544 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Slc1a6O35544 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc1a6O35544 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc1a6O35544 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.04□□□□□ -0.16
Slc1a6O35544 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.04□□□□□ -0.16
Slc1a6O35544 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Slc1a6O35544 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.04□□□□□ -0.16
Slc1a6O35544 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.04□□□□□ -0.16
Slc1a6O35544 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Slc1a6O35544 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.04□□□□□ -0.16
Slc1a6O35544 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Slc1a6O35544 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.04□□□□□ -0.16
Slc1a6O35544 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Slc1a6O35544 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Slc1a6O35544 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Slc1a6O35544 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Gm16198-201ENSMUST00000118766 670 ntBASIC14.03□□□□□ -0.16
Slc1a6O35544 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Slc1a6O35544 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.03□□□□□ -0.16
Slc1a6O35544 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.03□□□□□ -0.16
Slc1a6O35544 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.03□□□□□ -0.16
Slc1a6O35544 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.03□□□□□ -0.16
Slc1a6O35544 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Slc1a6O35544 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Slc1a6O35544 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Slc1a6O35544 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.03□□□□□ -0.16
Slc1a6O35544 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.03□□□□□ -0.16
Slc1a6O35544 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Slc1a6O35544 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms