Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.28□□□□□ -0.6
Efnb3O35393 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.28□□□□□ -0.6
Efnb3O35393 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Efnb3O35393 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Efnb3O35393 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Efnb3O35393 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Efnb3O35393 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.6
Efnb3O35393 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Efnb3O35393 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Efnb3O35393 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Efnb3O35393 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Efnb3O35393 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Efnb3O35393 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Efnb3O35393 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Efnb3O35393 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Efnb3O35393 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Efnb3O35393 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Efnb3O35393 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.27□□□□□ -0.61
Efnb3O35393 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.27□□□□□ -0.61
Efnb3O35393 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Efnb3O35393 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Efnb3O35393 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Efnb3O35393 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Efnb3O35393 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Efnb3O35393 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Efnb3O35393 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.27□□□□□ -0.61
Efnb3O35393 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Efnb3O35393 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Efnb3O35393 Gm7461-201ENSMUST00000058918 827 ntBASIC11.27□□□□□ -0.61
Efnb3O35393 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Efnb3O35393 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Efnb3O35393 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Efnb3O35393 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Efnb3O35393 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.27□□□□□ -0.61
Efnb3O35393 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Efnb3O35393 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.27□□□□□ -0.61
Efnb3O35393 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Efnb3O35393 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.27□□□□□ -0.61
Efnb3O35393 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Efnb3O35393 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Efnb3O35393 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Efnb3O35393 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Efnb3O35393 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Efnb3O35393 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Efnb3O35393 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Efnb3O35393 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.26□□□□□ -0.61
Efnb3O35393 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Efnb3O35393 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Efnb3O35393 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Efnb3O35393 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Efnb3O35393 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Efnb3O35393 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.26□□□□□ -0.61
Efnb3O35393 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Efnb3O35393 Gm11764-201ENSMUST00000120221 623 ntBASIC11.26□□□□□ -0.61
Efnb3O35393 Gm8584-201ENSMUST00000171982 758 ntBASIC11.26□□□□□ -0.61
Efnb3O35393 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.26□□□□□ -0.61
Efnb3O35393 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.26□□□□□ -0.61
Efnb3O35393 Mzt1-203ENSMUST00000227948 952 ntBASIC11.26□□□□□ -0.61
Efnb3O35393 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Efnb3O35393 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Efnb3O35393 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Efnb3O35393 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Efnb3O35393 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Efnb3O35393 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Efnb3O35393 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.26□□□□□ -0.61
Efnb3O35393 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.26□□□□□ -0.61
Efnb3O35393 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Efnb3O35393 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Efnb3O35393 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Efnb3O35393 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Efnb3O35393 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Efnb3O35393 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Efnb3O35393 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
Efnb3O35393 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.26□□□□□ -0.61
Efnb3O35393 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Efnb3O35393 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Efnb3O35393 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Efnb3O35393 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.25□□□□□ -0.61
Efnb3O35393 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Efnb3O35393 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.25□□□□□ -0.61
Efnb3O35393 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.25□□□□□ -0.61
Efnb3O35393 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Efnb3O35393 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms