Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Gm8584-201ENSMUST00000171982 758 ntBASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Gm6888-201ENSMUST00000221983 706 ntBASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf11aO35305 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf11aO35305 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Gm6916-202ENSMUST00000205523 195 ntBASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf11aO35305 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf11aO35305 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf11aO35305 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf11aO35305 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf11aO35305 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf11aO35305 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf11aO35305 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf11aO35305 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf11aO35305 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf11aO35305 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 633.1 ms