Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Alx4O35137 Gm25925-201ENSMUST00000158314 306 ntBASIC12.72□□□□□ -0.37
Alx4O35137 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Alx4O35137 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx4O35137 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Alx4O35137 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx4O35137 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx4O35137 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Alx4O35137 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx4O35137 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Alx4O35137 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.72□□□□□ -0.37
Alx4O35137 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx4O35137 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx4O35137 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx4O35137 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Alx4O35137 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx4O35137 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx4O35137 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Alx4O35137 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx4O35137 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx4O35137 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx4O35137 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx4O35137 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx4O35137 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx4O35137 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx4O35137 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Alx4O35137 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx4O35137 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Alx4O35137 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Alx4O35137 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Alx4O35137 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Alx4O35137 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Alx4O35137 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx4O35137 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.71□□□□□ -0.37
Alx4O35137 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.71□□□□□ -0.37
Alx4O35137 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Alx4O35137 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx4O35137 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx4O35137 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx4O35137 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx4O35137 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx4O35137 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx4O35137 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx4O35137 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Alx4O35137 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.71□□□□□ -0.38
Alx4O35137 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Alx4O35137 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Alx4O35137 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Alx4O35137 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Alx4O35137 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
Alx4O35137 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Alx4O35137 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Alx4O35137 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Alx4O35137 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Alx4O35137 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Alx4O35137 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Alx4O35137 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Alx4O35137 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Alx4O35137 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Alx4O35137 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Alx4O35137 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Alx4O35137 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.7□□□□□ -0.38
Alx4O35137 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Alx4O35137 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.7□□□□□ -0.38
Alx4O35137 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Alx4O35137 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Gm13597-201ENSMUST00000121239 375 ntBASIC12.7□□□□□ -0.38
Alx4O35137 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Alx4O35137 Gm18041-201ENSMUST00000218210 618 ntBASIC12.7□□□□□ -0.38
Alx4O35137 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.7□□□□□ -0.38
Alx4O35137 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.7□□□□□ -0.38
Alx4O35137 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.7□□□□□ -0.38
Alx4O35137 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Alx4O35137 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.7□□□□□ -0.38
Alx4O35137 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Alx4O35137 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Alx4O35137 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx4O35137 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms