Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp42B2RQC2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp42B2RQC2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp42B2RQC2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp42B2RQC2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Usp42B2RQC2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp42B2RQC2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp42B2RQC2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp42B2RQC2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Usp42B2RQC2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Usp42B2RQC2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Usp42B2RQC2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp42B2RQC2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp42B2RQC2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp42B2RQC2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp42B2RQC2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Usp42B2RQC2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp42B2RQC2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp42B2RQC2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp42B2RQC2 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp42B2RQC2 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.65■□□□□ 0.26
Usp42B2RQC2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp42B2RQC2 Gm43703-201ENSMUST00000200523 763 ntBASIC16.65■□□□□ 0.26
Usp42B2RQC2 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.65■□□□□ 0.26
Usp42B2RQC2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp42B2RQC2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp42B2RQC2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp42B2RQC2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp42B2RQC2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp42B2RQC2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Usp42B2RQC2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp42B2RQC2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.64■□□□□ 0.25
Usp42B2RQC2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Gm27306-201ENSMUST00000183970 107 ntBASIC16.64■□□□□ 0.25
Usp42B2RQC2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.64■□□□□ 0.25
Usp42B2RQC2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Gm9229-201ENSMUST00000222777 126 ntBASIC16.64■□□□□ 0.25
Usp42B2RQC2 Gm9063-201ENSMUST00000223299 582 ntBASIC16.64■□□□□ 0.25
Usp42B2RQC2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.64■□□□□ 0.25
Usp42B2RQC2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp42B2RQC2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp42B2RQC2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp42B2RQC2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp42B2RQC2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Usp42B2RQC2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp42B2RQC2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp42B2RQC2 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.63■□□□□ 0.25
Usp42B2RQC2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Usp42B2RQC2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp42B2RQC2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp42B2RQC2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp42B2RQC2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.63■□□□□ 0.25
Usp42B2RQC2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp42B2RQC2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp42B2RQC2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.63■□□□□ 0.25
Usp42B2RQC2 Gm7775-201ENSMUST00000218871 853 ntBASIC16.63■□□□□ 0.25
Usp42B2RQC2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp42B2RQC2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Usp42B2RQC2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Usp42B2RQC2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp42B2RQC2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp42B2RQC2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Usp42B2RQC2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Usp42B2RQC2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Usp42B2RQC2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp42B2RQC2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp42B2RQC2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.62■□□□□ 0.25
Usp42B2RQC2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp42B2RQC2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Usp42B2RQC2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp42B2RQC2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp42B2RQC2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.62■□□□□ 0.25
Usp42B2RQC2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp42B2RQC2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp42B2RQC2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Usp42B2RQC2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp42B2RQC2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms