Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.42□□□□□ -0.58
Chd6A3KFM7 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.42□□□□□ -0.58
Chd6A3KFM7 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.42□□□□□ -0.58
Chd6A3KFM7 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.42□□□□□ -0.58
Chd6A3KFM7 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.42□□□□□ -0.58
Chd6A3KFM7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.42□□□□□ -0.58
Chd6A3KFM7 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.42□□□□□ -0.58
Chd6A3KFM7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Gm29155-201ENSMUST00000185910 269 ntBASIC11.42□□□□□ -0.58
Chd6A3KFM7 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.42□□□□□ -0.58
Chd6A3KFM7 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Gm11222-201ENSMUST00000119005 738 ntBASIC11.41□□□□□ -0.58
Chd6A3KFM7 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.41□□□□□ -0.58
Chd6A3KFM7 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Gm13369-201ENSMUST00000119442 987 ntBASIC11.41□□□□□ -0.58
Chd6A3KFM7 Gm11964-201ENSMUST00000120982 444 ntBASIC11.41□□□□□ -0.58
Chd6A3KFM7 Gm16379-201ENSMUST00000161469 348 ntBASIC11.41□□□□□ -0.58
Chd6A3KFM7 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Gm8762-201ENSMUST00000193486 339 ntBASIC11.41□□□□□ -0.58
Chd6A3KFM7 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.41□□□□□ -0.58
Chd6A3KFM7 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Chd6A3KFM7 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Gm37497-201ENSMUST00000195830 798 ntBASIC11.4□□□□□ -0.58
Chd6A3KFM7 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd6A3KFM7 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.4□□□□□ -0.58
Chd6A3KFM7 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd6A3KFM7 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.4□□□□□ -0.58
Chd6A3KFM7 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms