Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Trav12-1A0N8R1 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav12-1A0N8R1 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav12-1A0N8R1 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trav12-1A0N8R1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.9□□□□□ -0.51
Trav12-1A0N8R1 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.9□□□□□ -0.51
Trav12-1A0N8R1 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav12-1A0N8R1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Trav12-1A0N8R1 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav12-1A0N8R1 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Gm9385-201ENSMUST00000117563 472 ntBASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Gm15483-201ENSMUST00000120338 456 ntBASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12-1A0N8R1 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Gm7461-201ENSMUST00000058918 827 ntBASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.88□□□□□ -0.51
Trav12-1A0N8R1 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms