Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Gm12728V9GX31 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm12728V9GX31 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm12728V9GX31 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Gm12728V9GX31 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.51■□□□□ 0.39
Gm12728V9GX31 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.51■□□□□ 0.39
Gm12728V9GX31 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.51■□□□□ 0.39
Gm12728V9GX31 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm12728V9GX31 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm12728V9GX31 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm12728V9GX31 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm12728V9GX31 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm12728V9GX31 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm12728V9GX31 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.5■□□□□ 0.39
Gm12728V9GX31 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Gm12728V9GX31 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.5■□□□□ 0.39
Gm12728V9GX31 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.5■□□□□ 0.39
Gm12728V9GX31 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm12728V9GX31 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Gm12728V9GX31 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm12728V9GX31 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm12728V9GX31 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.49■□□□□ 0.39
Gm12728V9GX31 Gm4799-201ENSMUST00000095396 657 ntBASIC17.49■□□□□ 0.39
Gm12728V9GX31 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.49■□□□□ 0.39
Gm12728V9GX31 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm12728V9GX31 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Gm12728V9GX31 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
Gm12728V9GX31 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Gm12728V9GX31 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm12728V9GX31 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm12728V9GX31 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm12728V9GX31 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm12728V9GX31 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm12728V9GX31 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm12728V9GX31 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm12728V9GX31 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm12728V9GX31 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm12728V9GX31 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm12728V9GX31 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Gm12728V9GX31 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm12728V9GX31 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gm12728V9GX31 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm12728V9GX31 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Gm12728V9GX31 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Gm12728V9GX31 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Gm12728V9GX31 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Gm12728V9GX31 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.38
Gm12728V9GX31 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm12728V9GX31 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.45■□□□□ 0.38
Gm12728V9GX31 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.45■□□□□ 0.38
Gm12728V9GX31 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm12728V9GX31 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gm12728V9GX31 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm12728V9GX31 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm12728V9GX31 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.44■□□□□ 0.38
Gm12728V9GX31 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.44■□□□□ 0.38
Gm12728V9GX31 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm12728V9GX31 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm12728V9GX31 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gm12728V9GX31 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gm12728V9GX31 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm12728V9GX31 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm12728V9GX31 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm12728V9GX31 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm12728V9GX31 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Gm12728V9GX31 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.43■□□□□ 0.38
Gm12728V9GX31 Gm8503-201ENSMUST00000118131 455 ntBASIC17.43■□□□□ 0.38
Gm12728V9GX31 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.43■□□□□ 0.38
Gm12728V9GX31 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.43■□□□□ 0.38
Gm12728V9GX31 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Gm12728V9GX31 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gm12728V9GX31 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm12728V9GX31 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.42■□□□□ 0.38
Gm12728V9GX31 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm12728V9GX31 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm12728V9GX31 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm12728V9GX31 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Gm12728V9GX31 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.41■□□□□ 0.38
Gm12728V9GX31 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.41■□□□□ 0.38
Gm12728V9GX31 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gm12728V9GX31 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm12728V9GX31 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm12728V9GX31 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm12728V9GX31 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm12728V9GX31 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Gm12728V9GX31 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm12728V9GX31 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm12728V9GX31 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm12728V9GX31 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm12728V9GX31 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm12728V9GX31 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.39■□□□□ 0.37
Gm12728V9GX31 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm12728V9GX31 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm12728V9GX31 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm12728V9GX31 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm12728V9GX31 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm12728V9GX31 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.38■□□□□ 0.37
Gm12728V9GX31 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm12728V9GX31 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm12728V9GX31 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms