Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdh17Q9R100 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Cdh17Q9R100 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Cdh17Q9R100 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Cdh17Q9R100 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cdh17Q9R100 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Cdh17Q9R100 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdh17Q9R100 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cdh17Q9R100 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Cdh17Q9R100 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdh17Q9R100 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.41■■□□□ 1.02
Cdh17Q9R100 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdh17Q9R100 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdh17Q9R100 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdh17Q9R100 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdh17Q9R100 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.41■■□□□ 1.02
Cdh17Q9R100 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.4■■□□□ 1.02
Cdh17Q9R100 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdh17Q9R100 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdh17Q9R100 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Cdh17Q9R100 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdh17Q9R100 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdh17Q9R100 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdh17Q9R100 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdh17Q9R100 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdh17Q9R100 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cdh17Q9R100 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cdh17Q9R100 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Cdh17Q9R100 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Cdh17Q9R100 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdh17Q9R100 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.39■■□□□ 1.01
Cdh17Q9R100 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cdh17Q9R100 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cdh17Q9R100 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.38■■□□□ 1.01
Cdh17Q9R100 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdh17Q9R100 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cdh17Q9R100 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.38■■□□□ 1.01
Cdh17Q9R100 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdh17Q9R100 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.37■■□□□ 1.01
Cdh17Q9R100 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cdh17Q9R100 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cdh17Q9R100 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdh17Q9R100 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdh17Q9R100 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdh17Q9R100 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdh17Q9R100 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdh17Q9R100 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdh17Q9R100 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdh17Q9R100 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdh17Q9R100 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cdh17Q9R100 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.34■■□□□ 1.01
Cdh17Q9R100 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.34■■□□□ 1.01
Cdh17Q9R100 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdh17Q9R100 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.33■■□□□ 1.01
Cdh17Q9R100 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
Cdh17Q9R100 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.33■■□□□ 1
Cdh17Q9R100 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cdh17Q9R100 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.33■■□□□ 1
Cdh17Q9R100 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.33■■□□□ 1
Cdh17Q9R100 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cdh17Q9R100 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.33■■□□□ 1
Cdh17Q9R100 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdh17Q9R100 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Cdh17Q9R100 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdh17Q9R100 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.32■■□□□ 1
Cdh17Q9R100 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.32■■□□□ 1
Cdh17Q9R100 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Cdh17Q9R100 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdh17Q9R100 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdh17Q9R100 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdh17Q9R100 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Cdh17Q9R100 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.31■■□□□ 1
Cdh17Q9R100 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cdh17Q9R100 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.31■■□□□ 1
Cdh17Q9R100 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Cdh17Q9R100 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cdh17Q9R100 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Cdh17Q9R100 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdh17Q9R100 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.3■■□□□ 1
Cdh17Q9R100 Gm6311-201ENSMUST00000073790 878 ntBASIC21.3■■□□□ 1
Cdh17Q9R100 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh17Q9R100 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh17Q9R100 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cdh17Q9R100 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.29■■□□□ 1
Cdh17Q9R100 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh17Q9R100 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh17Q9R100 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.29■■□□□ 1
Cdh17Q9R100 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh17Q9R100 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cdh17Q9R100 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh17Q9R100 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh17Q9R100 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh17Q9R100 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh17Q9R100 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
Cdh17Q9R100 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.28■■□□□ 1
Cdh17Q9R100 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh17Q9R100 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh17Q9R100 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cdh17Q9R100 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh17Q9R100 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms