Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Zc3h8Q9JJ48 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zc3h8Q9JJ48 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zc3h8Q9JJ48 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zc3h8Q9JJ48 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Zc3h8Q9JJ48 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zc3h8Q9JJ48 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zc3h8Q9JJ48 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zc3h8Q9JJ48 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zc3h8Q9JJ48 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Zc3h8Q9JJ48 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Zc3h8Q9JJ48 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Zc3h8Q9JJ48 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Zc3h8Q9JJ48 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Zc3h8Q9JJ48 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Zc3h8Q9JJ48 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Zc3h8Q9JJ48 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.35■□□□□ 0.85
Zc3h8Q9JJ48 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Zc3h8Q9JJ48 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Zc3h8Q9JJ48 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Zc3h8Q9JJ48 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Zc3h8Q9JJ48 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.35■□□□□ 0.85
Zc3h8Q9JJ48 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Zc3h8Q9JJ48 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Zc3h8Q9JJ48 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Zc3h8Q9JJ48 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.34■□□□□ 0.85
Zc3h8Q9JJ48 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Zc3h8Q9JJ48 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Zc3h8Q9JJ48 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Zc3h8Q9JJ48 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Zc3h8Q9JJ48 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.33■□□□□ 0.85
Zc3h8Q9JJ48 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.33■□□□□ 0.85
Zc3h8Q9JJ48 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Zc3h8Q9JJ48 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Zc3h8Q9JJ48 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Zc3h8Q9JJ48 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.32■□□□□ 0.84
Zc3h8Q9JJ48 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.32■□□□□ 0.84
Zc3h8Q9JJ48 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Zc3h8Q9JJ48 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Zc3h8Q9JJ48 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h8Q9JJ48 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h8Q9JJ48 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h8Q9JJ48 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h8Q9JJ48 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h8Q9JJ48 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h8Q9JJ48 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h8Q9JJ48 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h8Q9JJ48 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h8Q9JJ48 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h8Q9JJ48 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h8Q9JJ48 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Zc3h8Q9JJ48 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Zc3h8Q9JJ48 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Zc3h8Q9JJ48 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Zc3h8Q9JJ48 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Zc3h8Q9JJ48 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zc3h8Q9JJ48 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zc3h8Q9JJ48 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.29■□□□□ 0.84
Zc3h8Q9JJ48 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Zc3h8Q9JJ48 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zc3h8Q9JJ48 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Zc3h8Q9JJ48 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.28■□□□□ 0.84
Zc3h8Q9JJ48 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Zc3h8Q9JJ48 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zc3h8Q9JJ48 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.27■□□□□ 0.84
Zc3h8Q9JJ48 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Zc3h8Q9JJ48 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Zc3h8Q9JJ48 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Zc3h8Q9JJ48 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.27■□□□□ 0.84
Zc3h8Q9JJ48 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.27■□□□□ 0.84
Zc3h8Q9JJ48 Gm45444-201ENSMUST00000211394 898 ntBASIC20.27■□□□□ 0.84
Zc3h8Q9JJ48 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Zc3h8Q9JJ48 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.26■□□□□ 0.83
Zc3h8Q9JJ48 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.26■□□□□ 0.83
Zc3h8Q9JJ48 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Zc3h8Q9JJ48 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Zc3h8Q9JJ48 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zc3h8Q9JJ48 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zc3h8Q9JJ48 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.26■□□□□ 0.83
Zc3h8Q9JJ48 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zc3h8Q9JJ48 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Zc3h8Q9JJ48 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Zc3h8Q9JJ48 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zc3h8Q9JJ48 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Zc3h8Q9JJ48 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zc3h8Q9JJ48 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.25■□□□□ 0.83
Zc3h8Q9JJ48 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Zc3h8Q9JJ48 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Zc3h8Q9JJ48 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zc3h8Q9JJ48 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Zc3h8Q9JJ48 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zc3h8Q9JJ48 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zc3h8Q9JJ48 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zc3h8Q9JJ48 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.24■□□□□ 0.83
Zc3h8Q9JJ48 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zc3h8Q9JJ48 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Zc3h8Q9JJ48 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zc3h8Q9JJ48 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Zc3h8Q9JJ48 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Zc3h8Q9JJ48 Gm43566-201ENSMUST00000196851 808 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms