Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ap3s1Q9DCR2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Ap3s1Q9DCR2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ap3s1Q9DCR2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ap3s1Q9DCR2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ap3s1Q9DCR2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ap3s1Q9DCR2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
Ap3s1Q9DCR2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ap3s1Q9DCR2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.56■□□□□ 0.72
Ap3s1Q9DCR2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ap3s1Q9DCR2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ap3s1Q9DCR2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Ap3s1Q9DCR2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.55■□□□□ 0.72
Ap3s1Q9DCR2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ap3s1Q9DCR2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ap3s1Q9DCR2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ap3s1Q9DCR2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ap3s1Q9DCR2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ap3s1Q9DCR2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ap3s1Q9DCR2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ap3s1Q9DCR2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.54■□□□□ 0.72
Ap3s1Q9DCR2 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.53■□□□□ 0.72
Ap3s1Q9DCR2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ap3s1Q9DCR2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ap3s1Q9DCR2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.53■□□□□ 0.72
Ap3s1Q9DCR2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.53■□□□□ 0.72
Ap3s1Q9DCR2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ap3s1Q9DCR2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ap3s1Q9DCR2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ap3s1Q9DCR2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ap3s1Q9DCR2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ap3s1Q9DCR2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Ap3s1Q9DCR2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ap3s1Q9DCR2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ap3s1Q9DCR2 Notumos-201ENSMUST00000151998 2659 ntBASIC19.52■□□□□ 0.72
Ap3s1Q9DCR2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ap3s1Q9DCR2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ap3s1Q9DCR2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ap3s1Q9DCR2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.51■□□□□ 0.71
Ap3s1Q9DCR2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ap3s1Q9DCR2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ap3s1Q9DCR2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.5■□□□□ 0.71
Ap3s1Q9DCR2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.5■□□□□ 0.71
Ap3s1Q9DCR2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ap3s1Q9DCR2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ap3s1Q9DCR2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ap3s1Q9DCR2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
Ap3s1Q9DCR2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ap3s1Q9DCR2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ap3s1Q9DCR2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ap3s1Q9DCR2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ap3s1Q9DCR2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ap3s1Q9DCR2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ap3s1Q9DCR2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ap3s1Q9DCR2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ap3s1Q9DCR2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Ap3s1Q9DCR2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Ap3s1Q9DCR2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ap3s1Q9DCR2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ap3s1Q9DCR2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ap3s1Q9DCR2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ap3s1Q9DCR2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ap3s1Q9DCR2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Ap3s1Q9DCR2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ap3s1Q9DCR2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ap3s1Q9DCR2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ap3s1Q9DCR2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.45■□□□□ 0.7
Ap3s1Q9DCR2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ap3s1Q9DCR2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ap3s1Q9DCR2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Ap3s1Q9DCR2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ap3s1Q9DCR2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ap3s1Q9DCR2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ap3s1Q9DCR2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ap3s1Q9DCR2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ap3s1Q9DCR2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ap3s1Q9DCR2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ap3s1Q9DCR2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ap3s1Q9DCR2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ap3s1Q9DCR2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ap3s1Q9DCR2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ap3s1Q9DCR2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ap3s1Q9DCR2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.42■□□□□ 0.7
Ap3s1Q9DCR2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ap3s1Q9DCR2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.41■□□□□ 0.7
Ap3s1Q9DCR2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ap3s1Q9DCR2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ap3s1Q9DCR2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ap3s1Q9DCR2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Ap3s1Q9DCR2 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.4■□□□□ 0.7
Ap3s1Q9DCR2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ap3s1Q9DCR2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.4■□□□□ 0.7
Ap3s1Q9DCR2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.4■□□□□ 0.7
Ap3s1Q9DCR2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ap3s1Q9DCR2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ap3s1Q9DCR2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ap3s1Q9DCR2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ap3s1Q9DCR2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ap3s1Q9DCR2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ap3s1Q9DCR2 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms