Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ssmem1Q9D9Y8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Ssmem1Q9D9Y8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ssmem1Q9D9Y8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ssmem1Q9D9Y8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ssmem1Q9D9Y8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.93■□□□□ 0.62
Ssmem1Q9D9Y8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ssmem1Q9D9Y8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ssmem1Q9D9Y8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ssmem1Q9D9Y8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ssmem1Q9D9Y8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.92■□□□□ 0.62
Ssmem1Q9D9Y8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ssmem1Q9D9Y8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ssmem1Q9D9Y8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ssmem1Q9D9Y8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.91■□□□□ 0.62
Ssmem1Q9D9Y8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssmem1Q9D9Y8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.91■□□□□ 0.62
Ssmem1Q9D9Y8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.91■□□□□ 0.62
Ssmem1Q9D9Y8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssmem1Q9D9Y8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssmem1Q9D9Y8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssmem1Q9D9Y8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssmem1Q9D9Y8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssmem1Q9D9Y8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssmem1Q9D9Y8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssmem1Q9D9Y8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssmem1Q9D9Y8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssmem1Q9D9Y8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ssmem1Q9D9Y8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ssmem1Q9D9Y8 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.9■□□□□ 0.62
Ssmem1Q9D9Y8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ssmem1Q9D9Y8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ssmem1Q9D9Y8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ssmem1Q9D9Y8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ssmem1Q9D9Y8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ssmem1Q9D9Y8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ssmem1Q9D9Y8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ssmem1Q9D9Y8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Ssmem1Q9D9Y8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ssmem1Q9D9Y8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ssmem1Q9D9Y8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ssmem1Q9D9Y8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ssmem1Q9D9Y8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.88■□□□□ 0.61
Ssmem1Q9D9Y8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ssmem1Q9D9Y8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ssmem1Q9D9Y8 Gm5921-201ENSMUST00000075898 882 ntBASIC18.88■□□□□ 0.61
Ssmem1Q9D9Y8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ssmem1Q9D9Y8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ssmem1Q9D9Y8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ssmem1Q9D9Y8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Ssmem1Q9D9Y8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ssmem1Q9D9Y8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ssmem1Q9D9Y8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ssmem1Q9D9Y8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ssmem1Q9D9Y8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ssmem1Q9D9Y8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ssmem1Q9D9Y8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ssmem1Q9D9Y8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ssmem1Q9D9Y8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.86■□□□□ 0.61
Ssmem1Q9D9Y8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ssmem1Q9D9Y8 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.86■□□□□ 0.61
Ssmem1Q9D9Y8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssmem1Q9D9Y8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssmem1Q9D9Y8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssmem1Q9D9Y8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssmem1Q9D9Y8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ssmem1Q9D9Y8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssmem1Q9D9Y8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssmem1Q9D9Y8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssmem1Q9D9Y8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssmem1Q9D9Y8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssmem1Q9D9Y8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ssmem1Q9D9Y8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ssmem1Q9D9Y8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Ssmem1Q9D9Y8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssmem1Q9D9Y8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.84■□□□□ 0.61
Ssmem1Q9D9Y8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssmem1Q9D9Y8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssmem1Q9D9Y8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssmem1Q9D9Y8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.83■□□□□ 0.61
Ssmem1Q9D9Y8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ssmem1Q9D9Y8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ssmem1Q9D9Y8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ssmem1Q9D9Y8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ssmem1Q9D9Y8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.83■□□□□ 0.6
Ssmem1Q9D9Y8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssmem1Q9D9Y8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssmem1Q9D9Y8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssmem1Q9D9Y8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ssmem1Q9D9Y8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssmem1Q9D9Y8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ssmem1Q9D9Y8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssmem1Q9D9Y8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssmem1Q9D9Y8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.81■□□□□ 0.6
Ssmem1Q9D9Y8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssmem1Q9D9Y8 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.81■□□□□ 0.6
Ssmem1Q9D9Y8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.81■□□□□ 0.6
Ssmem1Q9D9Y8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssmem1Q9D9Y8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssmem1Q9D9Y8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms