Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Snrnp48Q9D361 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Snrnp48Q9D361 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Snrnp48Q9D361 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.86■■□□□ 1.09
Snrnp48Q9D361 Gm27502-201ENSMUST00000183495 199 ntBASIC21.86■■□□□ 1.09
Snrnp48Q9D361 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Snrnp48Q9D361 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Snrnp48Q9D361 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Snrnp48Q9D361 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Snrnp48Q9D361 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Snrnp48Q9D361 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.85■■□□□ 1.09
Snrnp48Q9D361 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Snrnp48Q9D361 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Snrnp48Q9D361 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Snrnp48Q9D361 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Snrnp48Q9D361 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Snrnp48Q9D361 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.85■■□□□ 1.09
Snrnp48Q9D361 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Snrnp48Q9D361 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Snrnp48Q9D361 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Snrnp48Q9D361 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Snrnp48Q9D361 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Snrnp48Q9D361 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.84■■□□□ 1.09
Snrnp48Q9D361 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.84■■□□□ 1.09
Snrnp48Q9D361 Gm7332-201ENSMUST00000118351 454 ntBASIC21.84■■□□□ 1.09
Snrnp48Q9D361 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.84■■□□□ 1.09
Snrnp48Q9D361 Gm12366-201ENSMUST00000121722 873 ntBASIC21.84■■□□□ 1.09
Snrnp48Q9D361 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.84■■□□□ 1.09
Snrnp48Q9D361 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.84■■□□□ 1.09
Snrnp48Q9D361 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.84■■□□□ 1.09
Snrnp48Q9D361 Gm5786-201ENSMUST00000085368 882 ntBASIC21.84■■□□□ 1.09
Snrnp48Q9D361 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Snrnp48Q9D361 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Snrnp48Q9D361 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Snrnp48Q9D361 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Snrnp48Q9D361 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Snrnp48Q9D361 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
Snrnp48Q9D361 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Snrnp48Q9D361 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Snrnp48Q9D361 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Snrnp48Q9D361 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Snrnp48Q9D361 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Snrnp48Q9D361 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.82■■□□□ 1.08
Snrnp48Q9D361 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Snrnp48Q9D361 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Snrnp48Q9D361 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.81■■□□□ 1.08
Snrnp48Q9D361 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Snrnp48Q9D361 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Snrnp48Q9D361 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Snrnp48Q9D361 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Snrnp48Q9D361 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Snrnp48Q9D361 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Snrnp48Q9D361 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Snrnp48Q9D361 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Snrnp48Q9D361 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Snrnp48Q9D361 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Snrnp48Q9D361 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Snrnp48Q9D361 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Snrnp48Q9D361 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
Snrnp48Q9D361 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.79■■□□□ 1.08
Snrnp48Q9D361 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.79■■□□□ 1.08
Snrnp48Q9D361 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Snrnp48Q9D361 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Snrnp48Q9D361 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Snrnp48Q9D361 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.78■■□□□ 1.08
Snrnp48Q9D361 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Snrnp48Q9D361 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Snrnp48Q9D361 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.78■■□□□ 1.08
Snrnp48Q9D361 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Snrnp48Q9D361 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.78■■□□□ 1.08
Snrnp48Q9D361 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Snrnp48Q9D361 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.77■■□□□ 1.08
Snrnp48Q9D361 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Snrnp48Q9D361 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Snrnp48Q9D361 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.77■■□□□ 1.08
Snrnp48Q9D361 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Snrnp48Q9D361 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Snrnp48Q9D361 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Snrnp48Q9D361 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Snrnp48Q9D361 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Snrnp48Q9D361 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Snrnp48Q9D361 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Snrnp48Q9D361 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Snrnp48Q9D361 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Snrnp48Q9D361 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Snrnp48Q9D361 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Snrnp48Q9D361 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Snrnp48Q9D361 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Snrnp48Q9D361 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Snrnp48Q9D361 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Snrnp48Q9D361 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Snrnp48Q9D361 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Snrnp48Q9D361 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Snrnp48Q9D361 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Snrnp48Q9D361 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Snrnp48Q9D361 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Snrnp48Q9D361 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Snrnp48Q9D361 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.73■■□□□ 1.07
Snrnp48Q9D361 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Snrnp48Q9D361 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms