Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Upk1aQ9D132 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Upk1aQ9D132 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.89■□□□□ 0.93
Upk1aQ9D132 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Upk1aQ9D132 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Upk1aQ9D132 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Upk1aQ9D132 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Upk1aQ9D132 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.87■□□□□ 0.93
Upk1aQ9D132 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Upk1aQ9D132 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Upk1aQ9D132 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Upk1aQ9D132 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.87■□□□□ 0.93
Upk1aQ9D132 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Upk1aQ9D132 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Upk1aQ9D132 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Upk1aQ9D132 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Upk1aQ9D132 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Upk1aQ9D132 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.85■□□□□ 0.93
Upk1aQ9D132 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Upk1aQ9D132 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Upk1aQ9D132 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Upk1aQ9D132 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Upk1aQ9D132 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Upk1aQ9D132 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Upk1aQ9D132 Gm22567-201ENSMUST00000175542 342 ntBASIC20.84■□□□□ 0.93
Upk1aQ9D132 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Upk1aQ9D132 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Upk1aQ9D132 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.83■□□□□ 0.93
Upk1aQ9D132 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.83■□□□□ 0.93
Upk1aQ9D132 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Upk1aQ9D132 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Upk1aQ9D132 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.83■□□□□ 0.92
Upk1aQ9D132 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Upk1aQ9D132 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Upk1aQ9D132 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Upk1aQ9D132 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.82■□□□□ 0.92
Upk1aQ9D132 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.82■□□□□ 0.92
Upk1aQ9D132 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.81■□□□□ 0.92
Upk1aQ9D132 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Upk1aQ9D132 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.81■□□□□ 0.92
Upk1aQ9D132 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Upk1aQ9D132 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Upk1aQ9D132 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Upk1aQ9D132 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Upk1aQ9D132 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.8■□□□□ 0.92
Upk1aQ9D132 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Upk1aQ9D132 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Upk1aQ9D132 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Upk1aQ9D132 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Upk1aQ9D132 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Upk1aQ9D132 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Upk1aQ9D132 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Upk1aQ9D132 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Upk1aQ9D132 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Upk1aQ9D132 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Upk1aQ9D132 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Upk1aQ9D132 Gm8503-201ENSMUST00000118131 455 ntBASIC20.79■□□□□ 0.92
Upk1aQ9D132 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Upk1aQ9D132 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Upk1aQ9D132 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Upk1aQ9D132 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Upk1aQ9D132 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Upk1aQ9D132 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Upk1aQ9D132 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Upk1aQ9D132 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Upk1aQ9D132 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Upk1aQ9D132 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Upk1aQ9D132 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Upk1aQ9D132 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Upk1aQ9D132 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Upk1aQ9D132 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Upk1aQ9D132 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Upk1aQ9D132 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Upk1aQ9D132 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Upk1aQ9D132 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Upk1aQ9D132 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Upk1aQ9D132 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Upk1aQ9D132 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Upk1aQ9D132 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Upk1aQ9D132 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Upk1aQ9D132 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Upk1aQ9D132 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.75■□□□□ 0.91
Upk1aQ9D132 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Upk1aQ9D132 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.75■□□□□ 0.91
Upk1aQ9D132 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Upk1aQ9D132 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Upk1aQ9D132 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Upk1aQ9D132 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Upk1aQ9D132 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Upk1aQ9D132 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.74■□□□□ 0.91
Upk1aQ9D132 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Upk1aQ9D132 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Upk1aQ9D132 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Upk1aQ9D132 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Upk1aQ9D132 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Upk1aQ9D132 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Upk1aQ9D132 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Upk1aQ9D132 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.73■□□□□ 0.91
Upk1aQ9D132 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.73■□□□□ 0.91
Upk1aQ9D132 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms