Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chaf1bQ9D0N7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.53■□□□□ 0.88
Chaf1bQ9D0N7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Chaf1bQ9D0N7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chaf1bQ9D0N7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chaf1bQ9D0N7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chaf1bQ9D0N7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chaf1bQ9D0N7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chaf1bQ9D0N7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chaf1bQ9D0N7 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chaf1bQ9D0N7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.52■□□□□ 0.88
Chaf1bQ9D0N7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chaf1bQ9D0N7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chaf1bQ9D0N7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chaf1bQ9D0N7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chaf1bQ9D0N7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chaf1bQ9D0N7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chaf1bQ9D0N7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.51■□□□□ 0.87
Chaf1bQ9D0N7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chaf1bQ9D0N7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.51■□□□□ 0.87
Chaf1bQ9D0N7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chaf1bQ9D0N7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chaf1bQ9D0N7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.5■□□□□ 0.87
Chaf1bQ9D0N7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.5■□□□□ 0.87
Chaf1bQ9D0N7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.5■□□□□ 0.87
Chaf1bQ9D0N7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chaf1bQ9D0N7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chaf1bQ9D0N7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chaf1bQ9D0N7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chaf1bQ9D0N7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Chaf1bQ9D0N7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Chaf1bQ9D0N7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Chaf1bQ9D0N7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.49■□□□□ 0.87
Chaf1bQ9D0N7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Chaf1bQ9D0N7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chaf1bQ9D0N7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.49■□□□□ 0.87
Chaf1bQ9D0N7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chaf1bQ9D0N7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.48■□□□□ 0.87
Chaf1bQ9D0N7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chaf1bQ9D0N7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chaf1bQ9D0N7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Chaf1bQ9D0N7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.47■□□□□ 0.87
Chaf1bQ9D0N7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chaf1bQ9D0N7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Chaf1bQ9D0N7 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chaf1bQ9D0N7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chaf1bQ9D0N7 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.47■□□□□ 0.87
Chaf1bQ9D0N7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chaf1bQ9D0N7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chaf1bQ9D0N7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Chaf1bQ9D0N7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chaf1bQ9D0N7 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chaf1bQ9D0N7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chaf1bQ9D0N7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chaf1bQ9D0N7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Chaf1bQ9D0N7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Chaf1bQ9D0N7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chaf1bQ9D0N7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chaf1bQ9D0N7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chaf1bQ9D0N7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chaf1bQ9D0N7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chaf1bQ9D0N7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chaf1bQ9D0N7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chaf1bQ9D0N7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chaf1bQ9D0N7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chaf1bQ9D0N7 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chaf1bQ9D0N7 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.43■□□□□ 0.86
Chaf1bQ9D0N7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Chaf1bQ9D0N7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Chaf1bQ9D0N7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chaf1bQ9D0N7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chaf1bQ9D0N7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chaf1bQ9D0N7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.42■□□□□ 0.86
Chaf1bQ9D0N7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chaf1bQ9D0N7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chaf1bQ9D0N7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chaf1bQ9D0N7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chaf1bQ9D0N7 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chaf1bQ9D0N7 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Chaf1bQ9D0N7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Chaf1bQ9D0N7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chaf1bQ9D0N7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Chaf1bQ9D0N7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chaf1bQ9D0N7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Chaf1bQ9D0N7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chaf1bQ9D0N7 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chaf1bQ9D0N7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chaf1bQ9D0N7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chaf1bQ9D0N7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chaf1bQ9D0N7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Chaf1bQ9D0N7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chaf1bQ9D0N7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chaf1bQ9D0N7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chaf1bQ9D0N7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Chaf1bQ9D0N7 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Chaf1bQ9D0N7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chaf1bQ9D0N7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chaf1bQ9D0N7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chaf1bQ9D0N7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Chaf1bQ9D0N7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms