Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Lysmd1Q9D0E3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
Lysmd1Q9D0E3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Lysmd1Q9D0E3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.56■■□□□ 1.52
Lysmd1Q9D0E3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC24.56■■□□□ 1.52
Lysmd1Q9D0E3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Lysmd1Q9D0E3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Lysmd1Q9D0E3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Lysmd1Q9D0E3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Lysmd1Q9D0E3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC24.55■■□□□ 1.52
Lysmd1Q9D0E3 Gm7291-201ENSMUST00000199147 382 ntBASIC24.55■■□□□ 1.52
Lysmd1Q9D0E3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Lysmd1Q9D0E3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Lysmd1Q9D0E3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Lysmd1Q9D0E3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Lysmd1Q9D0E3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.54■■□□□ 1.52
Lysmd1Q9D0E3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC24.54■■□□□ 1.52
Lysmd1Q9D0E3 Gm5874-201ENSMUST00000096101 508 ntBASIC24.54■■□□□ 1.52
Lysmd1Q9D0E3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Lysmd1Q9D0E3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Lysmd1Q9D0E3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Lysmd1Q9D0E3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Lysmd1Q9D0E3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC24.53■■□□□ 1.52
Lysmd1Q9D0E3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Lysmd1Q9D0E3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Lysmd1Q9D0E3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Lysmd1Q9D0E3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Lysmd1Q9D0E3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Lysmd1Q9D0E3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC24.52■■□□□ 1.52
Lysmd1Q9D0E3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
Lysmd1Q9D0E3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC24.52■■□□□ 1.52
Lysmd1Q9D0E3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Lysmd1Q9D0E3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Lysmd1Q9D0E3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC24.51■■□□□ 1.51
Lysmd1Q9D0E3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Lysmd1Q9D0E3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Lysmd1Q9D0E3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Lysmd1Q9D0E3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Lysmd1Q9D0E3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Lysmd1Q9D0E3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Lysmd1Q9D0E3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Lysmd1Q9D0E3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Lysmd1Q9D0E3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Lysmd1Q9D0E3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Lysmd1Q9D0E3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Lysmd1Q9D0E3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Lysmd1Q9D0E3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Lysmd1Q9D0E3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
Lysmd1Q9D0E3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Lysmd1Q9D0E3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
Lysmd1Q9D0E3 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.48■■□□□ 1.51
Lysmd1Q9D0E3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Lysmd1Q9D0E3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Lysmd1Q9D0E3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Lysmd1Q9D0E3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC24.47■■□□□ 1.51
Lysmd1Q9D0E3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Lysmd1Q9D0E3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC24.46■■□□□ 1.51
Lysmd1Q9D0E3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Lysmd1Q9D0E3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Lysmd1Q9D0E3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Lysmd1Q9D0E3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Lysmd1Q9D0E3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Lysmd1Q9D0E3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Lysmd1Q9D0E3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
Lysmd1Q9D0E3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC24.45■■□□□ 1.5
Lysmd1Q9D0E3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC24.45■■□□□ 1.5
Lysmd1Q9D0E3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC24.45■■□□□ 1.5
Lysmd1Q9D0E3 Gm21168-201ENSMUST00000199646 1096 ntBASIC24.45■■□□□ 1.5
Lysmd1Q9D0E3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC24.44■■□□□ 1.5
Lysmd1Q9D0E3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Lysmd1Q9D0E3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Lysmd1Q9D0E3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Lysmd1Q9D0E3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Lysmd1Q9D0E3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC24.43■■□□□ 1.5
Lysmd1Q9D0E3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC24.43■■□□□ 1.5
Lysmd1Q9D0E3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC24.43■■□□□ 1.5
Lysmd1Q9D0E3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC24.42■■□□□ 1.5
Lysmd1Q9D0E3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Lysmd1Q9D0E3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Lysmd1Q9D0E3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Lysmd1Q9D0E3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Lysmd1Q9D0E3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC24.41■■□□□ 1.5
Lysmd1Q9D0E3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Lysmd1Q9D0E3 Gm6139-201ENSMUST00000079261 882 ntBASIC24.41■■□□□ 1.5
Lysmd1Q9D0E3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Lysmd1Q9D0E3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Lysmd1Q9D0E3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Lysmd1Q9D0E3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Lysmd1Q9D0E3 Gm26571-201ENSMUST00000181399 666 ntBASIC24.4■■□□□ 1.5
Lysmd1Q9D0E3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Lysmd1Q9D0E3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
Lysmd1Q9D0E3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Lysmd1Q9D0E3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC24.39■■□□□ 1.49
Lysmd1Q9D0E3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Lysmd1Q9D0E3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Lysmd1Q9D0E3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Lysmd1Q9D0E3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC24.38■■□□□ 1.49
Lysmd1Q9D0E3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Lysmd1Q9D0E3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC24.38■■□□□ 1.49
Lysmd1Q9D0E3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms