Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Khdc3Q9CWU5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Khdc3Q9CWU5 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Khdc3Q9CWU5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.95■□□□□ 0.94
Khdc3Q9CWU5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Khdc3Q9CWU5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Khdc3Q9CWU5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Khdc3Q9CWU5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.94■□□□□ 0.94
Khdc3Q9CWU5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Khdc3Q9CWU5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Khdc3Q9CWU5 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Khdc3Q9CWU5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Khdc3Q9CWU5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.94■□□□□ 0.94
Khdc3Q9CWU5 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Khdc3Q9CWU5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Khdc3Q9CWU5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.93■□□□□ 0.94
Khdc3Q9CWU5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.93■□□□□ 0.94
Khdc3Q9CWU5 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.93■□□□□ 0.94
Khdc3Q9CWU5 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.93■□□□□ 0.94
Khdc3Q9CWU5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Khdc3Q9CWU5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Khdc3Q9CWU5 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Khdc3Q9CWU5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Khdc3Q9CWU5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Khdc3Q9CWU5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Khdc3Q9CWU5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
Khdc3Q9CWU5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.92■□□□□ 0.94
Khdc3Q9CWU5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Khdc3Q9CWU5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Khdc3Q9CWU5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Khdc3Q9CWU5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Khdc3Q9CWU5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Khdc3Q9CWU5 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Khdc3Q9CWU5 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.91■□□□□ 0.94
Khdc3Q9CWU5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Khdc3Q9CWU5 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Khdc3Q9CWU5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Khdc3Q9CWU5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Khdc3Q9CWU5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.89■□□□□ 0.93
Khdc3Q9CWU5 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Khdc3Q9CWU5 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Khdc3Q9CWU5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Khdc3Q9CWU5 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Khdc3Q9CWU5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Khdc3Q9CWU5 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Khdc3Q9CWU5 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Khdc3Q9CWU5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.88■□□□□ 0.93
Khdc3Q9CWU5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Khdc3Q9CWU5 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Khdc3Q9CWU5 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.88■□□□□ 0.93
Khdc3Q9CWU5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Khdc3Q9CWU5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Khdc3Q9CWU5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Khdc3Q9CWU5 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Khdc3Q9CWU5 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Khdc3Q9CWU5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Khdc3Q9CWU5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Khdc3Q9CWU5 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Khdc3Q9CWU5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Khdc3Q9CWU5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Khdc3Q9CWU5 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Khdc3Q9CWU5 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Khdc3Q9CWU5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Khdc3Q9CWU5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Khdc3Q9CWU5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Khdc3Q9CWU5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Khdc3Q9CWU5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.85■□□□□ 0.93
Khdc3Q9CWU5 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Khdc3Q9CWU5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Khdc3Q9CWU5 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.85■□□□□ 0.93
Khdc3Q9CWU5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Khdc3Q9CWU5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Khdc3Q9CWU5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Khdc3Q9CWU5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Khdc3Q9CWU5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Khdc3Q9CWU5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Khdc3Q9CWU5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Khdc3Q9CWU5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Khdc3Q9CWU5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Khdc3Q9CWU5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Khdc3Q9CWU5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Khdc3Q9CWU5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Khdc3Q9CWU5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Khdc3Q9CWU5 Gm27502-201ENSMUST00000183495 199 ntBASIC20.82■□□□□ 0.92
Khdc3Q9CWU5 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Khdc3Q9CWU5 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Khdc3Q9CWU5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Khdc3Q9CWU5 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Khdc3Q9CWU5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.81■□□□□ 0.92
Khdc3Q9CWU5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Khdc3Q9CWU5 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Khdc3Q9CWU5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Khdc3Q9CWU5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Khdc3Q9CWU5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Khdc3Q9CWU5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Khdc3Q9CWU5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Khdc3Q9CWU5 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.79■□□□□ 0.92
Khdc3Q9CWU5 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Khdc3Q9CWU5 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Khdc3Q9CWU5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms