Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.33■□□□□ 0.69
Pfdn1Q9CWM4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pfdn1Q9CWM4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pfdn1Q9CWM4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pfdn1Q9CWM4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Pfdn1Q9CWM4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pfdn1Q9CWM4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pfdn1Q9CWM4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.32■□□□□ 0.68
Pfdn1Q9CWM4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pfdn1Q9CWM4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pfdn1Q9CWM4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pfdn1Q9CWM4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pfdn1Q9CWM4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pfdn1Q9CWM4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.32■□□□□ 0.68
Pfdn1Q9CWM4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Pfdn1Q9CWM4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pfdn1Q9CWM4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pfdn1Q9CWM4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pfdn1Q9CWM4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pfdn1Q9CWM4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Pfdn1Q9CWM4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pfdn1Q9CWM4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pfdn1Q9CWM4 Gm27322-201ENSMUST00000184007 104 ntBASIC19.3■□□□□ 0.68
Pfdn1Q9CWM4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pfdn1Q9CWM4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pfdn1Q9CWM4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pfdn1Q9CWM4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pfdn1Q9CWM4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pfdn1Q9CWM4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.3■□□□□ 0.68
Pfdn1Q9CWM4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pfdn1Q9CWM4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pfdn1Q9CWM4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pfdn1Q9CWM4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.29■□□□□ 0.68
Pfdn1Q9CWM4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Pfdn1Q9CWM4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pfdn1Q9CWM4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.29■□□□□ 0.68
Pfdn1Q9CWM4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pfdn1Q9CWM4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pfdn1Q9CWM4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pfdn1Q9CWM4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pfdn1Q9CWM4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pfdn1Q9CWM4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pfdn1Q9CWM4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.28■□□□□ 0.68
Pfdn1Q9CWM4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pfdn1Q9CWM4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pfdn1Q9CWM4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pfdn1Q9CWM4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Pfdn1Q9CWM4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pfdn1Q9CWM4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pfdn1Q9CWM4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pfdn1Q9CWM4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Pfdn1Q9CWM4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pfdn1Q9CWM4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pfdn1Q9CWM4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pfdn1Q9CWM4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Pfdn1Q9CWM4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pfdn1Q9CWM4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pfdn1Q9CWM4 Peli2-204ENSMUST00000226513 1320 ntBASIC19.25■□□□□ 0.67
Pfdn1Q9CWM4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pfdn1Q9CWM4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pfdn1Q9CWM4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pfdn1Q9CWM4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pfdn1Q9CWM4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.25■□□□□ 0.67
Pfdn1Q9CWM4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pfdn1Q9CWM4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pfdn1Q9CWM4 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.25■□□□□ 0.67
Pfdn1Q9CWM4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pfdn1Q9CWM4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pfdn1Q9CWM4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pfdn1Q9CWM4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pfdn1Q9CWM4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pfdn1Q9CWM4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pfdn1Q9CWM4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
Pfdn1Q9CWM4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pfdn1Q9CWM4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pfdn1Q9CWM4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pfdn1Q9CWM4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pfdn1Q9CWM4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pfdn1Q9CWM4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pfdn1Q9CWM4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pfdn1Q9CWM4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pfdn1Q9CWM4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pfdn1Q9CWM4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Pfdn1Q9CWM4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pfdn1Q9CWM4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pfdn1Q9CWM4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pfdn1Q9CWM4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pfdn1Q9CWM4 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.2■□□□□ 0.66
Pfdn1Q9CWM4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pfdn1Q9CWM4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pfdn1Q9CWM4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pfdn1Q9CWM4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.19■□□□□ 0.66
Pfdn1Q9CWM4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pfdn1Q9CWM4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pfdn1Q9CWM4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pfdn1Q9CWM4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Pfdn1Q9CWM4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pfdn1Q9CWM4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pfdn1Q9CWM4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pfdn1Q9CWM4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms