Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Prdm9Q96EQ9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prdm9Q96EQ9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prdm9Q96EQ9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Prdm9Q96EQ9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prdm9Q96EQ9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Prdm9Q96EQ9 Gm5812-201ENSMUST00000061073 957 ntBASIC21.68■■□□□ 1.06
Prdm9Q96EQ9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Prdm9Q96EQ9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prdm9Q96EQ9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prdm9Q96EQ9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prdm9Q96EQ9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Prdm9Q96EQ9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Prdm9Q96EQ9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prdm9Q96EQ9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Prdm9Q96EQ9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Prdm9Q96EQ9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Prdm9Q96EQ9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Prdm9Q96EQ9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Prdm9Q96EQ9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Prdm9Q96EQ9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.65■■□□□ 1.06
Prdm9Q96EQ9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Prdm9Q96EQ9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Prdm9Q96EQ9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Prdm9Q96EQ9 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.64■■□□□ 1.05
Prdm9Q96EQ9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Prdm9Q96EQ9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Prdm9Q96EQ9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.05
Prdm9Q96EQ9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prdm9Q96EQ9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Prdm9Q96EQ9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Prdm9Q96EQ9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Prdm9Q96EQ9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prdm9Q96EQ9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Prdm9Q96EQ9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.62■■□□□ 1.05
Prdm9Q96EQ9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Prdm9Q96EQ9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prdm9Q96EQ9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Prdm9Q96EQ9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Prdm9Q96EQ9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prdm9Q96EQ9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
Prdm9Q96EQ9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Prdm9Q96EQ9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prdm9Q96EQ9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prdm9Q96EQ9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prdm9Q96EQ9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.6■■□□□ 1.05
Prdm9Q96EQ9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prdm9Q96EQ9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.6■■□□□ 1.05
Prdm9Q96EQ9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prdm9Q96EQ9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Prdm9Q96EQ9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Prdm9Q96EQ9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Prdm9Q96EQ9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Prdm9Q96EQ9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.59■■□□□ 1.05
Prdm9Q96EQ9 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.59■■□□□ 1.05
Prdm9Q96EQ9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Prdm9Q96EQ9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Prdm9Q96EQ9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Prdm9Q96EQ9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Prdm9Q96EQ9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.58■■□□□ 1.05
Prdm9Q96EQ9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.58■■□□□ 1.05
Prdm9Q96EQ9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.58■■□□□ 1.04
Prdm9Q96EQ9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Prdm9Q96EQ9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Prdm9Q96EQ9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Prdm9Q96EQ9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Prdm9Q96EQ9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Prdm9Q96EQ9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Prdm9Q96EQ9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prdm9Q96EQ9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prdm9Q96EQ9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prdm9Q96EQ9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prdm9Q96EQ9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prdm9Q96EQ9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.55■■□□□ 1.04
Prdm9Q96EQ9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prdm9Q96EQ9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.55■■□□□ 1.04
Prdm9Q96EQ9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prdm9Q96EQ9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prdm9Q96EQ9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prdm9Q96EQ9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prdm9Q96EQ9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Prdm9Q96EQ9 Gm15546-201ENSMUST00000122095 826 ntBASIC21.54■■□□□ 1.04
Prdm9Q96EQ9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.54■■□□□ 1.04
Prdm9Q96EQ9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Prdm9Q96EQ9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Prdm9Q96EQ9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.54■■□□□ 1.04
Prdm9Q96EQ9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prdm9Q96EQ9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Prdm9Q96EQ9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prdm9Q96EQ9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Prdm9Q96EQ9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.53■■□□□ 1.04
Prdm9Q96EQ9 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.53■■□□□ 1.04
Prdm9Q96EQ9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Prdm9Q96EQ9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prdm9Q96EQ9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prdm9Q96EQ9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prdm9Q96EQ9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prdm9Q96EQ9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.52■■□□□ 1.04
Prdm9Q96EQ9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Prdm9Q96EQ9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms