Protein–RNA interactions for Protein: Q923D4

Sf3b5, Splicing factor 3B subunit 5, mousemouse

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b5Q923D4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3b5Q923D4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3b5Q923D4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3b5Q923D4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3b5Q923D4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.41■□□□□ 0.7
Sf3b5Q923D4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3b5Q923D4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3b5Q923D4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3b5Q923D4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3b5Q923D4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3b5Q923D4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sf3b5Q923D4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Sf3b5Q923D4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3b5Q923D4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b5Q923D4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b5Q923D4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b5Q923D4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b5Q923D4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b5Q923D4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.38■□□□□ 0.69
Sf3b5Q923D4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b5Q923D4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b5Q923D4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b5Q923D4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3b5Q923D4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3b5Q923D4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3b5Q923D4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3b5Q923D4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Sf3b5Q923D4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3b5Q923D4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Sf3b5Q923D4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3b5Q923D4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3b5Q923D4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3b5Q923D4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3b5Q923D4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.36■□□□□ 0.69
Sf3b5Q923D4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3b5Q923D4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Sf3b5Q923D4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3b5Q923D4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3b5Q923D4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3b5Q923D4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.36■□□□□ 0.69
Sf3b5Q923D4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3b5Q923D4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.35■□□□□ 0.69
Sf3b5Q923D4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3b5Q923D4 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.35■□□□□ 0.69
Sf3b5Q923D4 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.35■□□□□ 0.69
Sf3b5Q923D4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b5Q923D4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b5Q923D4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sf3b5Q923D4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Sf3b5Q923D4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b5Q923D4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b5Q923D4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b5Q923D4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Sf3b5Q923D4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sf3b5Q923D4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sf3b5Q923D4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sf3b5Q923D4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3b5Q923D4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3b5Q923D4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3b5Q923D4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3b5Q923D4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Sf3b5Q923D4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.32■□□□□ 0.68
Sf3b5Q923D4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.32■□□□□ 0.68
Sf3b5Q923D4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Sf3b5Q923D4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3b5Q923D4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3b5Q923D4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3b5Q923D4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3b5Q923D4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3b5Q923D4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3b5Q923D4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.31■□□□□ 0.68
Sf3b5Q923D4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Sf3b5Q923D4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3b5Q923D4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3b5Q923D4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3b5Q923D4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3b5Q923D4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3b5Q923D4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3b5Q923D4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.29■□□□□ 0.68
Sf3b5Q923D4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3b5Q923D4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b5Q923D4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b5Q923D4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b5Q923D4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Sf3b5Q923D4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b5Q923D4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.28■□□□□ 0.68
Sf3b5Q923D4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b5Q923D4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sf3b5Q923D4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sf3b5Q923D4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.27■□□□□ 0.68
Sf3b5Q923D4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sf3b5Q923D4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sf3b5Q923D4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Sf3b5Q923D4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sf3b5Q923D4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.26■□□□□ 0.67
Sf3b5Q923D4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Sf3b5Q923D4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Sf3b5Q923D4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b5Q923D4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3b5Q923D4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms