Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb4Q91XZ6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb4Q91XZ6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb4Q91XZ6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb4Q91XZ6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Pcdhb4Q91XZ6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Pcdhb4Q91XZ6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Pcdhb4Q91XZ6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.67■■□□□ 1.06
Pcdhb4Q91XZ6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.67■■□□□ 1.06
Pcdhb4Q91XZ6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb4Q91XZ6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Pcdhb4Q91XZ6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb4Q91XZ6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.66■■□□□ 1.06
Pcdhb4Q91XZ6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb4Q91XZ6 Gm6311-201ENSMUST00000073790 878 ntBASIC21.66■■□□□ 1.06
Pcdhb4Q91XZ6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb4Q91XZ6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb4Q91XZ6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb4Q91XZ6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb4Q91XZ6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb4Q91XZ6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb4Q91XZ6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.65■■□□□ 1.06
Pcdhb4Q91XZ6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb4Q91XZ6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb4Q91XZ6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Pcdhb4Q91XZ6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb4Q91XZ6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb4Q91XZ6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Pcdhb4Q91XZ6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.63■■□□□ 1.05
Pcdhb4Q91XZ6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
Pcdhb4Q91XZ6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.63■■□□□ 1.05
Pcdhb4Q91XZ6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb4Q91XZ6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb4Q91XZ6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb4Q91XZ6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Pcdhb4Q91XZ6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb4Q91XZ6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb4Q91XZ6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb4Q91XZ6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb4Q91XZ6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb4Q91XZ6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb4Q91XZ6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb4Q91XZ6 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.61■■□□□ 1.05
Pcdhb4Q91XZ6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Pcdhb4Q91XZ6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb4Q91XZ6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Pcdhb4Q91XZ6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb4Q91XZ6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.61■■□□□ 1.05
Pcdhb4Q91XZ6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb4Q91XZ6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb4Q91XZ6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Pcdhb4Q91XZ6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb4Q91XZ6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb4Q91XZ6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb4Q91XZ6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdhb4Q91XZ6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb4Q91XZ6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb4Q91XZ6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb4Q91XZ6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Pcdhb4Q91XZ6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb4Q91XZ6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb4Q91XZ6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb4Q91XZ6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb4Q91XZ6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb4Q91XZ6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb4Q91XZ6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb4Q91XZ6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb4Q91XZ6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.58■■□□□ 1.04
Pcdhb4Q91XZ6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhb4Q91XZ6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhb4Q91XZ6 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.58■■□□□ 1.04
Pcdhb4Q91XZ6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb4Q91XZ6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Pcdhb4Q91XZ6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb4Q91XZ6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb4Q91XZ6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb4Q91XZ6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb4Q91XZ6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb4Q91XZ6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb4Q91XZ6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.56■■□□□ 1.04
Pcdhb4Q91XZ6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb4Q91XZ6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.56■■□□□ 1.04
Pcdhb4Q91XZ6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb4Q91XZ6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Pcdhb4Q91XZ6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb4Q91XZ6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb4Q91XZ6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb4Q91XZ6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb4Q91XZ6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb4Q91XZ6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb4Q91XZ6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.55■■□□□ 1.04
Pcdhb4Q91XZ6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.55■■□□□ 1.04
Pcdhb4Q91XZ6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb4Q91XZ6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb4Q91XZ6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb4Q91XZ6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb4Q91XZ6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb4Q91XZ6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb4Q91XZ6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb4Q91XZ6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms