Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhga11Q91XY8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhga11Q91XY8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhga11Q91XY8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhga11Q91XY8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.05■□□□□ 0.96
Pcdhga11Q91XY8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.05■□□□□ 0.96
Pcdhga11Q91XY8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhga11Q91XY8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.05■□□□□ 0.96
Pcdhga11Q91XY8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhga11Q91XY8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdhga11Q91XY8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.04■□□□□ 0.96
Pcdhga11Q91XY8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhga11Q91XY8 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.03■□□□□ 0.96
Pcdhga11Q91XY8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga11Q91XY8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga11Q91XY8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga11Q91XY8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga11Q91XY8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga11Q91XY8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga11Q91XY8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga11Q91XY8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga11Q91XY8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Pcdhga11Q91XY8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhga11Q91XY8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhga11Q91XY8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.02■□□□□ 0.96
Pcdhga11Q91XY8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Pcdhga11Q91XY8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhga11Q91XY8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.01■□□□□ 0.95
Pcdhga11Q91XY8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhga11Q91XY8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.01■□□□□ 0.95
Pcdhga11Q91XY8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhga11Q91XY8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhga11Q91XY8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhga11Q91XY8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21■□□□□ 0.95
Pcdhga11Q91XY8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga11Q91XY8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga11Q91XY8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga11Q91XY8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga11Q91XY8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga11Q91XY8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.99■□□□□ 0.95
Pcdhga11Q91XY8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhga11Q91XY8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhga11Q91XY8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhga11Q91XY8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga11Q91XY8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga11Q91XY8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Pcdhga11Q91XY8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga11Q91XY8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga11Q91XY8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga11Q91XY8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdhga11Q91XY8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga11Q91XY8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga11Q91XY8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga11Q91XY8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga11Q91XY8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga11Q91XY8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga11Q91XY8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdhga11Q91XY8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga11Q91XY8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Pcdhga11Q91XY8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Pcdhga11Q91XY8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhga11Q91XY8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhga11Q91XY8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhga11Q91XY8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhga11Q91XY8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Pcdhga11Q91XY8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhga11Q91XY8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhga11Q91XY8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Pcdhga11Q91XY8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.95■□□□□ 0.94
Pcdhga11Q91XY8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Pcdhga11Q91XY8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhga11Q91XY8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Pcdhga11Q91XY8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhga11Q91XY8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhga11Q91XY8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhga11Q91XY8 Gm22567-201ENSMUST00000175542 342 ntBASIC20.94■□□□□ 0.94
Pcdhga11Q91XY8 Gm44428-201ENSMUST00000204474 874 ntBASIC20.94■□□□□ 0.94
Pcdhga11Q91XY8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhga11Q91XY8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhga11Q91XY8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhga11Q91XY8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhga11Q91XY8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhga11Q91XY8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhga11Q91XY8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhga11Q91XY8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Pcdhga11Q91XY8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhga11Q91XY8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhga11Q91XY8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.93■□□□□ 0.94
Pcdhga11Q91XY8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Pcdhga11Q91XY8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhga11Q91XY8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhga11Q91XY8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhga11Q91XY8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhga11Q91XY8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhga11Q91XY8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhga11Q91XY8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Pcdhga11Q91XY8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhga11Q91XY8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhga11Q91XY8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhga11Q91XY8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms