Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.39■■□□□ 1.01
Pcdhga4Q91XY4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Pcdhga4Q91XY4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga4Q91XY4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga4Q91XY4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga4Q91XY4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga4Q91XY4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhga4Q91XY4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhga4Q91XY4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhga4Q91XY4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Pcdhga4Q91XY4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhga4Q91XY4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.37■■□□□ 1.01
Pcdhga4Q91XY4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhga4Q91XY4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhga4Q91XY4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.35■■□□□ 1.01
Pcdhga4Q91XY4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga4Q91XY4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Pcdhga4Q91XY4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.35■■□□□ 1.01
Pcdhga4Q91XY4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga4Q91XY4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.35■■□□□ 1.01
Pcdhga4Q91XY4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga4Q91XY4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga4Q91XY4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga4Q91XY4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga4Q91XY4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga4Q91XY4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga4Q91XY4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga4Q91XY4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhga4Q91XY4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhga4Q91XY4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhga4Q91XY4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhga4Q91XY4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhga4Q91XY4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhga4Q91XY4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhga4Q91XY4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga4Q91XY4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga4Q91XY4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.32■■□□□ 1
Pcdhga4Q91XY4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga4Q91XY4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.32■■□□□ 1
Pcdhga4Q91XY4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga4Q91XY4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga4Q91XY4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga4Q91XY4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga4Q91XY4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.32■■□□□ 1
Pcdhga4Q91XY4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga4Q91XY4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Pcdhga4Q91XY4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga4Q91XY4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Pcdhga4Q91XY4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga4Q91XY4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga4Q91XY4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga4Q91XY4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga4Q91XY4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga4Q91XY4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga4Q91XY4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga4Q91XY4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga4Q91XY4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.31■■□□□ 1
Pcdhga4Q91XY4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga4Q91XY4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
Pcdhga4Q91XY4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga4Q91XY4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Pcdhga4Q91XY4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Pcdhga4Q91XY4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.3■■□□□ 1
Pcdhga4Q91XY4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga4Q91XY4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga4Q91XY4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga4Q91XY4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga4Q91XY4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhga4Q91XY4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhga4Q91XY4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhga4Q91XY4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhga4Q91XY4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pcdhga4Q91XY4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhga4Q91XY4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Pcdhga4Q91XY4 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.29■■□□□ 1
Pcdhga4Q91XY4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pcdhga4Q91XY4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.28■■□□□ 1
Pcdhga4Q91XY4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhga4Q91XY4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
Pcdhga4Q91XY4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.28■■□□□ 1
Pcdhga4Q91XY4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhga4Q91XY4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhga4Q91XY4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Pcdhga4Q91XY4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Pcdhga4Q91XY4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhga4Q91XY4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.27■■□□□ 1
Pcdhga4Q91XY4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhga4Q91XY4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhga4Q91XY4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhga4Q91XY4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhga4Q91XY4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhga4Q91XY4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhga4Q91XY4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhga4Q91XY4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhga4Q91XY4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga4Q91XY4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.25■□□□□ 0.99
Pcdhga4Q91XY4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga4Q91XY4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Pcdhga4Q91XY4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga4Q91XY4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms