Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb21Q91V48 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb21Q91V48 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb21Q91V48 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb21Q91V48 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Pcdhb21Q91V48 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdhb21Q91V48 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb21Q91V48 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb21Q91V48 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Pcdhb21Q91V48 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb21Q91V48 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Pcdhb21Q91V48 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb21Q91V48 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Pcdhb21Q91V48 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Pcdhb21Q91V48 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Pcdhb21Q91V48 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb21Q91V48 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb21Q91V48 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb21Q91V48 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb21Q91V48 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb21Q91V48 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb21Q91V48 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb21Q91V48 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb21Q91V48 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb21Q91V48 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb21Q91V48 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.6■■□□□ 1.05
Pcdhb21Q91V48 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb21Q91V48 Gm10420-201ENSMUST00000121713 882 ntBASIC21.59■■□□□ 1.05
Pcdhb21Q91V48 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb21Q91V48 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb21Q91V48 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Pcdhb21Q91V48 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb21Q91V48 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
Pcdhb21Q91V48 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb21Q91V48 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb21Q91V48 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.57■■□□□ 1.04
Pcdhb21Q91V48 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb21Q91V48 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Pcdhb21Q91V48 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb21Q91V48 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Pcdhb21Q91V48 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb21Q91V48 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.56■■□□□ 1.04
Pcdhb21Q91V48 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb21Q91V48 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb21Q91V48 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb21Q91V48 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb21Q91V48 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb21Q91V48 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb21Q91V48 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.55■■□□□ 1.04
Pcdhb21Q91V48 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb21Q91V48 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb21Q91V48 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Pcdhb21Q91V48 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Pcdhb21Q91V48 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb21Q91V48 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.54■■□□□ 1.04
Pcdhb21Q91V48 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.54■■□□□ 1.04
Pcdhb21Q91V48 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Pcdhb21Q91V48 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Pcdhb21Q91V48 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb21Q91V48 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb21Q91V48 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb21Q91V48 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Pcdhb21Q91V48 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb21Q91V48 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb21Q91V48 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.53■■□□□ 1.04
Pcdhb21Q91V48 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb21Q91V48 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb21Q91V48 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb21Q91V48 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.52■■□□□ 1.04
Pcdhb21Q91V48 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb21Q91V48 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb21Q91V48 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb21Q91V48 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb21Q91V48 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.52■■□□□ 1.04
Pcdhb21Q91V48 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdhb21Q91V48 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb21Q91V48 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.51■■□□□ 1.03
Pcdhb21Q91V48 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb21Q91V48 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.51■■□□□ 1.03
Pcdhb21Q91V48 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb21Q91V48 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb21Q91V48 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb21Q91V48 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb21Q91V48 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb21Q91V48 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Pcdhb21Q91V48 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb21Q91V48 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb21Q91V48 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb21Q91V48 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb21Q91V48 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Pcdhb21Q91V48 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb21Q91V48 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Pcdhb21Q91V48 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb21Q91V48 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Pcdhb21Q91V48 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb21Q91V48 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
Pcdhb21Q91V48 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb21Q91V48 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.47■■□□□ 1.03
Pcdhb21Q91V48 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb21Q91V48 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms