Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh18Q8VHR0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.97■□□□□ 0.95
Pcdh18Q8VHR0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdh18Q8VHR0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh18Q8VHR0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh18Q8VHR0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcdh18Q8VHR0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcdh18Q8VHR0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh18Q8VHR0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.96■□□□□ 0.95
Pcdh18Q8VHR0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh18Q8VHR0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pcdh18Q8VHR0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh18Q8VHR0 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.95■□□□□ 0.94
Pcdh18Q8VHR0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh18Q8VHR0 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.95■□□□□ 0.94
Pcdh18Q8VHR0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh18Q8VHR0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh18Q8VHR0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh18Q8VHR0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh18Q8VHR0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh18Q8VHR0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.94■□□□□ 0.94
Pcdh18Q8VHR0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh18Q8VHR0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh18Q8VHR0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh18Q8VHR0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh18Q8VHR0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh18Q8VHR0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh18Q8VHR0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh18Q8VHR0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.93■□□□□ 0.94
Pcdh18Q8VHR0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh18Q8VHR0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh18Q8VHR0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdh18Q8VHR0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.93■□□□□ 0.94
Pcdh18Q8VHR0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh18Q8VHR0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh18Q8VHR0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.92■□□□□ 0.94
Pcdh18Q8VHR0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh18Q8VHR0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdh18Q8VHR0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.91■□□□□ 0.94
Pcdh18Q8VHR0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.91■□□□□ 0.94
Pcdh18Q8VHR0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.91■□□□□ 0.94
Pcdh18Q8VHR0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh18Q8VHR0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Pcdh18Q8VHR0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdh18Q8VHR0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh18Q8VHR0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh18Q8VHR0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh18Q8VHR0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Pcdh18Q8VHR0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh18Q8VHR0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdh18Q8VHR0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Pcdh18Q8VHR0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
Pcdh18Q8VHR0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh18Q8VHR0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh18Q8VHR0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh18Q8VHR0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh18Q8VHR0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh18Q8VHR0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.88■□□□□ 0.93
Pcdh18Q8VHR0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh18Q8VHR0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh18Q8VHR0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.87■□□□□ 0.93
Pcdh18Q8VHR0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh18Q8VHR0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh18Q8VHR0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh18Q8VHR0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh18Q8VHR0 Iqck-206ENSMUST00000208658 2891 ntBASIC20.87■□□□□ 0.93
Pcdh18Q8VHR0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh18Q8VHR0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh18Q8VHR0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh18Q8VHR0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh18Q8VHR0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh18Q8VHR0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh18Q8VHR0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Pcdh18Q8VHR0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh18Q8VHR0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Pcdh18Q8VHR0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh18Q8VHR0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh18Q8VHR0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh18Q8VHR0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh18Q8VHR0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh18Q8VHR0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh18Q8VHR0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh18Q8VHR0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Pcdh18Q8VHR0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pcdh18Q8VHR0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Pcdh18Q8VHR0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh18Q8VHR0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Pcdh18Q8VHR0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh18Q8VHR0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh18Q8VHR0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdh18Q8VHR0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh18Q8VHR0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Pcdh18Q8VHR0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh18Q8VHR0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh18Q8VHR0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh18Q8VHR0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh18Q8VHR0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh18Q8VHR0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh18Q8VHR0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh18Q8VHR0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms