Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.2■□□□□ 0.98
Rpusd1Q8VCZ8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Rpusd1Q8VCZ8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rpusd1Q8VCZ8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpusd1Q8VCZ8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rpusd1Q8VCZ8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rpusd1Q8VCZ8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.2■□□□□ 0.98
Rpusd1Q8VCZ8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Rpusd1Q8VCZ8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rpusd1Q8VCZ8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rpusd1Q8VCZ8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpusd1Q8VCZ8 Gm14117-201ENSMUST00000122417 843 ntBASIC21.18■□□□□ 0.98
Rpusd1Q8VCZ8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpusd1Q8VCZ8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpusd1Q8VCZ8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpusd1Q8VCZ8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpusd1Q8VCZ8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rpusd1Q8VCZ8 Gm9959-201ENSMUST00000068277 390 ntBASIC21.17■□□□□ 0.98
Rpusd1Q8VCZ8 Gm10232-201ENSMUST00000089221 720 ntBASIC21.17■□□□□ 0.98
Rpusd1Q8VCZ8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpusd1Q8VCZ8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.17■□□□□ 0.98
Rpusd1Q8VCZ8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpusd1Q8VCZ8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpusd1Q8VCZ8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpusd1Q8VCZ8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Rpusd1Q8VCZ8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.16■□□□□ 0.98
Rpusd1Q8VCZ8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpusd1Q8VCZ8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rpusd1Q8VCZ8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpusd1Q8VCZ8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpusd1Q8VCZ8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Rpusd1Q8VCZ8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rpusd1Q8VCZ8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rpusd1Q8VCZ8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpusd1Q8VCZ8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rpusd1Q8VCZ8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpusd1Q8VCZ8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpusd1Q8VCZ8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rpusd1Q8VCZ8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Rpusd1Q8VCZ8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.12■□□□□ 0.97
Rpusd1Q8VCZ8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpusd1Q8VCZ8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Rpusd1Q8VCZ8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpusd1Q8VCZ8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpusd1Q8VCZ8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rpusd1Q8VCZ8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Rpusd1Q8VCZ8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpusd1Q8VCZ8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rpusd1Q8VCZ8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpusd1Q8VCZ8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpusd1Q8VCZ8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpusd1Q8VCZ8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpusd1Q8VCZ8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpusd1Q8VCZ8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpusd1Q8VCZ8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rpusd1Q8VCZ8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpusd1Q8VCZ8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpusd1Q8VCZ8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rpusd1Q8VCZ8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rpusd1Q8VCZ8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Rpusd1Q8VCZ8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpusd1Q8VCZ8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rpusd1Q8VCZ8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Rpusd1Q8VCZ8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Rpusd1Q8VCZ8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rpusd1Q8VCZ8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Rpusd1Q8VCZ8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpusd1Q8VCZ8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpusd1Q8VCZ8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.07■□□□□ 0.96
Rpusd1Q8VCZ8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpusd1Q8VCZ8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rpusd1Q8VCZ8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Rpusd1Q8VCZ8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rpusd1Q8VCZ8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.06■□□□□ 0.96
Rpusd1Q8VCZ8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.06■□□□□ 0.96
Rpusd1Q8VCZ8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.06■□□□□ 0.96
Rpusd1Q8VCZ8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.06■□□□□ 0.96
Rpusd1Q8VCZ8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpusd1Q8VCZ8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpusd1Q8VCZ8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpusd1Q8VCZ8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpusd1Q8VCZ8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpusd1Q8VCZ8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rpusd1Q8VCZ8 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.05■□□□□ 0.96
Rpusd1Q8VCZ8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.05■□□□□ 0.96
Rpusd1Q8VCZ8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpusd1Q8VCZ8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpusd1Q8VCZ8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpusd1Q8VCZ8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rpusd1Q8VCZ8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpusd1Q8VCZ8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpusd1Q8VCZ8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpusd1Q8VCZ8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpusd1Q8VCZ8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rpusd1Q8VCZ8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rpusd1Q8VCZ8 Gm15039-201ENSMUST00000118914 875 ntBASIC21.03■□□□□ 0.96
Rpusd1Q8VCZ8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.03■□□□□ 0.96
Rpusd1Q8VCZ8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Rpusd1Q8VCZ8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Rpusd1Q8VCZ8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms