Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ndc1Q8VCB1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Ndc1Q8VCB1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.63■□□□□ 0.89
Ndc1Q8VCB1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Ndc1Q8VCB1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.63■□□□□ 0.89
Ndc1Q8VCB1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ndc1Q8VCB1 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.62■□□□□ 0.89
Ndc1Q8VCB1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ndc1Q8VCB1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.62■□□□□ 0.89
Ndc1Q8VCB1 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.62■□□□□ 0.89
Ndc1Q8VCB1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Ndc1Q8VCB1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ndc1Q8VCB1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ndc1Q8VCB1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ndc1Q8VCB1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ndc1Q8VCB1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.6■□□□□ 0.89
Ndc1Q8VCB1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ndc1Q8VCB1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.6■□□□□ 0.89
Ndc1Q8VCB1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ndc1Q8VCB1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ndc1Q8VCB1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ndc1Q8VCB1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ndc1Q8VCB1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.58■□□□□ 0.89
Ndc1Q8VCB1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ndc1Q8VCB1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ndc1Q8VCB1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ndc1Q8VCB1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Ndc1Q8VCB1 Gm13238-201ENSMUST00000117655 780 ntBASIC20.58■□□□□ 0.89
Ndc1Q8VCB1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ndc1Q8VCB1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ndc1Q8VCB1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ndc1Q8VCB1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Ndc1Q8VCB1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Ndc1Q8VCB1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ndc1Q8VCB1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ndc1Q8VCB1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ndc1Q8VCB1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ndc1Q8VCB1 Gm15546-201ENSMUST00000122095 826 ntBASIC20.56■□□□□ 0.88
Ndc1Q8VCB1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.56■□□□□ 0.88
Ndc1Q8VCB1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ndc1Q8VCB1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.56■□□□□ 0.88
Ndc1Q8VCB1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ndc1Q8VCB1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Ndc1Q8VCB1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ndc1Q8VCB1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Ndc1Q8VCB1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ndc1Q8VCB1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ndc1Q8VCB1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ndc1Q8VCB1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ndc1Q8VCB1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ndc1Q8VCB1 Gm45444-201ENSMUST00000211394 898 ntBASIC20.54■□□□□ 0.88
Ndc1Q8VCB1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ndc1Q8VCB1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ndc1Q8VCB1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ndc1Q8VCB1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ndc1Q8VCB1 Gm43566-201ENSMUST00000196851 808 ntBASIC20.53■□□□□ 0.88
Ndc1Q8VCB1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ndc1Q8VCB1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ndc1Q8VCB1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
Ndc1Q8VCB1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ndc1Q8VCB1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ndc1Q8VCB1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ndc1Q8VCB1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ndc1Q8VCB1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Ndc1Q8VCB1 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.52■□□□□ 0.88
Ndc1Q8VCB1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.52■□□□□ 0.88
Ndc1Q8VCB1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ndc1Q8VCB1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ndc1Q8VCB1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.52■□□□□ 0.87
Ndc1Q8VCB1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ndc1Q8VCB1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Ndc1Q8VCB1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ndc1Q8VCB1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ndc1Q8VCB1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.51■□□□□ 0.87
Ndc1Q8VCB1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.51■□□□□ 0.87
Ndc1Q8VCB1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.51■□□□□ 0.87
Ndc1Q8VCB1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ndc1Q8VCB1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ndc1Q8VCB1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ndc1Q8VCB1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ndc1Q8VCB1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ndc1Q8VCB1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ndc1Q8VCB1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ndc1Q8VCB1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ndc1Q8VCB1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ndc1Q8VCB1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ndc1Q8VCB1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ndc1Q8VCB1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ndc1Q8VCB1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ndc1Q8VCB1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ndc1Q8VCB1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ndc1Q8VCB1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ndc1Q8VCB1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ndc1Q8VCB1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ndc1Q8VCB1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ndc1Q8VCB1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ndc1Q8VCB1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ndc1Q8VCB1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ndc1Q8VCB1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ndc1Q8VCB1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms