Protein–RNA interactions for Protein: Q8R4T1

Cys1, Cystin-1, mousemouse

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cys1Q8R4T1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Cys1Q8R4T1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.05■■□□□ 1.12
Cys1Q8R4T1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.05■■□□□ 1.12
Cys1Q8R4T1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Cys1Q8R4T1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cys1Q8R4T1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cys1Q8R4T1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cys1Q8R4T1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cys1Q8R4T1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Cys1Q8R4T1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cys1Q8R4T1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cys1Q8R4T1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.03■■□□□ 1.12
Cys1Q8R4T1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cys1Q8R4T1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cys1Q8R4T1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cys1Q8R4T1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cys1Q8R4T1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cys1Q8R4T1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.02■■□□□ 1.11
Cys1Q8R4T1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Cys1Q8R4T1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Cys1Q8R4T1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cys1Q8R4T1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Cys1Q8R4T1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cys1Q8R4T1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cys1Q8R4T1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cys1Q8R4T1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cys1Q8R4T1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cys1Q8R4T1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cys1Q8R4T1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cys1Q8R4T1 Gm10420-201ENSMUST00000121713 882 ntBASIC21.99■■□□□ 1.11
Cys1Q8R4T1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cys1Q8R4T1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Cys1Q8R4T1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Cys1Q8R4T1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cys1Q8R4T1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cys1Q8R4T1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
Cys1Q8R4T1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cys1Q8R4T1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cys1Q8R4T1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.98■■□□□ 1.11
Cys1Q8R4T1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cys1Q8R4T1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cys1Q8R4T1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cys1Q8R4T1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Cys1Q8R4T1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Cys1Q8R4T1 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.97■■□□□ 1.11
Cys1Q8R4T1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cys1Q8R4T1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cys1Q8R4T1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cys1Q8R4T1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cys1Q8R4T1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cys1Q8R4T1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cys1Q8R4T1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.96■■□□□ 1.11
Cys1Q8R4T1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Cys1Q8R4T1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cys1Q8R4T1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Cys1Q8R4T1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cys1Q8R4T1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Cys1Q8R4T1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cys1Q8R4T1 Notumos-201ENSMUST00000151998 2659 ntBASIC21.94■■□□□ 1.1
Cys1Q8R4T1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Cys1Q8R4T1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cys1Q8R4T1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cys1Q8R4T1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Cys1Q8R4T1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cys1Q8R4T1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cys1Q8R4T1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.93■■□□□ 1.1
Cys1Q8R4T1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.93■■□□□ 1.1
Cys1Q8R4T1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cys1Q8R4T1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Cys1Q8R4T1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Cys1Q8R4T1 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.92■■□□□ 1.1
Cys1Q8R4T1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cys1Q8R4T1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cys1Q8R4T1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Cys1Q8R4T1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cys1Q8R4T1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Cys1Q8R4T1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cys1Q8R4T1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cys1Q8R4T1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Cys1Q8R4T1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cys1Q8R4T1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cys1Q8R4T1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Cys1Q8R4T1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.9■■□□□ 1.1
Cys1Q8R4T1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cys1Q8R4T1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cys1Q8R4T1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cys1Q8R4T1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cys1Q8R4T1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cys1Q8R4T1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cys1Q8R4T1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cys1Q8R4T1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Cys1Q8R4T1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Cys1Q8R4T1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cys1Q8R4T1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cys1Q8R4T1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cys1Q8R4T1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cys1Q8R4T1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
Cys1Q8R4T1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cys1Q8R4T1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cys1Q8R4T1 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms