Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Atp2a1Q8R429 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Atp2a1Q8R429 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Atp2a1Q8R429 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Atp2a1Q8R429 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Atp2a1Q8R429 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Atp2a1Q8R429 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Atp2a1Q8R429 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Atp2a1Q8R429 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Atp2a1Q8R429 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Atp2a1Q8R429 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Atp2a1Q8R429 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC24.54■■□□□ 1.52
Atp2a1Q8R429 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Atp2a1Q8R429 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC24.54■■□□□ 1.52
Atp2a1Q8R429 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Atp2a1Q8R429 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Atp2a1Q8R429 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Atp2a1Q8R429 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Atp2a1Q8R429 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Atp2a1Q8R429 Gm15820-201ENSMUST00000201566 728 ntBASIC24.53■■□□□ 1.52
Atp2a1Q8R429 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.53■■□□□ 1.52
Atp2a1Q8R429 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Atp2a1Q8R429 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Atp2a1Q8R429 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.52■■□□□ 1.52
Atp2a1Q8R429 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Atp2a1Q8R429 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Atp2a1Q8R429 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Atp2a1Q8R429 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC24.51■■□□□ 1.51
Atp2a1Q8R429 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Atp2a1Q8R429 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Atp2a1Q8R429 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Atp2a1Q8R429 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Atp2a1Q8R429 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Atp2a1Q8R429 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Atp2a1Q8R429 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Atp2a1Q8R429 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Atp2a1Q8R429 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Atp2a1Q8R429 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24.49■■□□□ 1.51
Atp2a1Q8R429 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Atp2a1Q8R429 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Atp2a1Q8R429 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Atp2a1Q8R429 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Atp2a1Q8R429 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Atp2a1Q8R429 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Atp2a1Q8R429 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Atp2a1Q8R429 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Atp2a1Q8R429 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Atp2a1Q8R429 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Atp2a1Q8R429 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
Atp2a1Q8R429 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Atp2a1Q8R429 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Atp2a1Q8R429 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.46■■□□□ 1.51
Atp2a1Q8R429 Gm18755-201ENSMUST00000218030 1099 ntBASIC24.46■■□□□ 1.51
Atp2a1Q8R429 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Atp2a1Q8R429 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.46■■□□□ 1.51
Atp2a1Q8R429 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Atp2a1Q8R429 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Atp2a1Q8R429 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Atp2a1Q8R429 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC24.45■■□□□ 1.51
Atp2a1Q8R429 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Atp2a1Q8R429 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Atp2a1Q8R429 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Atp2a1Q8R429 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Atp2a1Q8R429 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Atp2a1Q8R429 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC24.45■■□□□ 1.5
Atp2a1Q8R429 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Atp2a1Q8R429 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Atp2a1Q8R429 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Atp2a1Q8R429 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Atp2a1Q8R429 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
Atp2a1Q8R429 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Atp2a1Q8R429 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Atp2a1Q8R429 Rps24-207ENSMUST00000224568 714 ntBASIC24.44■■□□□ 1.5
Atp2a1Q8R429 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Atp2a1Q8R429 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Atp2a1Q8R429 Gm45102-201ENSMUST00000207427 857 ntBASIC24.43■■□□□ 1.5
Atp2a1Q8R429 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC24.43■■□□□ 1.5
Atp2a1Q8R429 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Atp2a1Q8R429 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Atp2a1Q8R429 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Atp2a1Q8R429 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Atp2a1Q8R429 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Atp2a1Q8R429 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Atp2a1Q8R429 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.41■■□□□ 1.5
Atp2a1Q8R429 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Atp2a1Q8R429 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Atp2a1Q8R429 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Atp2a1Q8R429 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
Atp2a1Q8R429 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Atp2a1Q8R429 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Atp2a1Q8R429 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Atp2a1Q8R429 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Atp2a1Q8R429 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.39■■□□□ 1.5
Atp2a1Q8R429 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC24.39■■□□□ 1.49
Atp2a1Q8R429 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Atp2a1Q8R429 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Atp2a1Q8R429 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Atp2a1Q8R429 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Atp2a1Q8R429 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Atp2a1Q8R429 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC24.38■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms