Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cuedc1Q8R3V6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cuedc1Q8R3V6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cuedc1Q8R3V6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cuedc1Q8R3V6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.73■□□□□ 0.75
Cuedc1Q8R3V6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.73■□□□□ 0.75
Cuedc1Q8R3V6 Gm9959-201ENSMUST00000068277 390 ntBASIC19.73■□□□□ 0.75
Cuedc1Q8R3V6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cuedc1Q8R3V6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cuedc1Q8R3V6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cuedc1Q8R3V6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cuedc1Q8R3V6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cuedc1Q8R3V6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cuedc1Q8R3V6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cuedc1Q8R3V6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cuedc1Q8R3V6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cuedc1Q8R3V6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cuedc1Q8R3V6 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.71■□□□□ 0.75
Cuedc1Q8R3V6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cuedc1Q8R3V6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Cuedc1Q8R3V6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cuedc1Q8R3V6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cuedc1Q8R3V6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cuedc1Q8R3V6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cuedc1Q8R3V6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cuedc1Q8R3V6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cuedc1Q8R3V6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cuedc1Q8R3V6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cuedc1Q8R3V6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Cuedc1Q8R3V6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cuedc1Q8R3V6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cuedc1Q8R3V6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cuedc1Q8R3V6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cuedc1Q8R3V6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cuedc1Q8R3V6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cuedc1Q8R3V6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cuedc1Q8R3V6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cuedc1Q8R3V6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cuedc1Q8R3V6 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.68■□□□□ 0.74
Cuedc1Q8R3V6 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.68■□□□□ 0.74
Cuedc1Q8R3V6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cuedc1Q8R3V6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cuedc1Q8R3V6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cuedc1Q8R3V6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cuedc1Q8R3V6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.67■□□□□ 0.74
Cuedc1Q8R3V6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cuedc1Q8R3V6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cuedc1Q8R3V6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.66■□□□□ 0.74
Cuedc1Q8R3V6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cuedc1Q8R3V6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cuedc1Q8R3V6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cuedc1Q8R3V6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cuedc1Q8R3V6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.66■□□□□ 0.74
Cuedc1Q8R3V6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cuedc1Q8R3V6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cuedc1Q8R3V6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.65■□□□□ 0.74
Cuedc1Q8R3V6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cuedc1Q8R3V6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Cuedc1Q8R3V6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cuedc1Q8R3V6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cuedc1Q8R3V6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cuedc1Q8R3V6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cuedc1Q8R3V6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cuedc1Q8R3V6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cuedc1Q8R3V6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.63■□□□□ 0.73
Cuedc1Q8R3V6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.63■□□□□ 0.73
Cuedc1Q8R3V6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cuedc1Q8R3V6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cuedc1Q8R3V6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cuedc1Q8R3V6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cuedc1Q8R3V6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Cuedc1Q8R3V6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.62■□□□□ 0.73
Cuedc1Q8R3V6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cuedc1Q8R3V6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cuedc1Q8R3V6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cuedc1Q8R3V6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cuedc1Q8R3V6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.6■□□□□ 0.73
Cuedc1Q8R3V6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Cuedc1Q8R3V6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cuedc1Q8R3V6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.6■□□□□ 0.73
Cuedc1Q8R3V6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cuedc1Q8R3V6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Cuedc1Q8R3V6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Cuedc1Q8R3V6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.6■□□□□ 0.73
Cuedc1Q8R3V6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.59■□□□□ 0.73
Cuedc1Q8R3V6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Cuedc1Q8R3V6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cuedc1Q8R3V6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.59■□□□□ 0.73
Cuedc1Q8R3V6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cuedc1Q8R3V6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cuedc1Q8R3V6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cuedc1Q8R3V6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.58■□□□□ 0.72
Cuedc1Q8R3V6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cuedc1Q8R3V6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cuedc1Q8R3V6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cuedc1Q8R3V6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cuedc1Q8R3V6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Cuedc1Q8R3V6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cuedc1Q8R3V6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.57■□□□□ 0.72
Cuedc1Q8R3V6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms