Protein–RNA interactions for Protein: Q8R1M0

Hmces, Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein, mousemouse

Known RBP Predictions only

Length 353 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmcesQ8R1M0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
HmcesQ8R1M0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
HmcesQ8R1M0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC27.62■■■□□ 2.01
HmcesQ8R1M0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
HmcesQ8R1M0 Gm13241-201ENSMUST00000094493 780 ntBASIC27.62■■■□□ 2.01
HmcesQ8R1M0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
HmcesQ8R1M0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
HmcesQ8R1M0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC27.61■■■□□ 2.01
HmcesQ8R1M0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
HmcesQ8R1M0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
HmcesQ8R1M0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
HmcesQ8R1M0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
HmcesQ8R1M0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
HmcesQ8R1M0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
HmcesQ8R1M0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
HmcesQ8R1M0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC27.57■■■□□ 2
HmcesQ8R1M0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC27.57■■■□□ 2
HmcesQ8R1M0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27.57■■■□□ 2
HmcesQ8R1M0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC27.57■■■□□ 2
HmcesQ8R1M0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
HmcesQ8R1M0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
HmcesQ8R1M0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
HmcesQ8R1M0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
HmcesQ8R1M0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
HmcesQ8R1M0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC27.55■■■□□ 2
HmcesQ8R1M0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
HmcesQ8R1M0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
HmcesQ8R1M0 Gm43034-201ENSMUST00000198678 1364 ntBASIC27.54■■■□□ 2
HmcesQ8R1M0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC27.54■■■□□ 2
HmcesQ8R1M0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
HmcesQ8R1M0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC27.53■■■□□ 2
HmcesQ8R1M0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC27.53■■■□□ 2
HmcesQ8R1M0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
HmcesQ8R1M0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
HmcesQ8R1M0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC27.52■■■□□ 2
HmcesQ8R1M0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
HmcesQ8R1M0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
HmcesQ8R1M0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC27.52■■■□□ 2
HmcesQ8R1M0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC27.52■■■□□ 2
HmcesQ8R1M0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
HmcesQ8R1M0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
HmcesQ8R1M0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC27.51■■■□□ 2
HmcesQ8R1M0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
HmcesQ8R1M0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
HmcesQ8R1M0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
HmcesQ8R1M0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
HmcesQ8R1M0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
HmcesQ8R1M0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC27.5■■□□□ 1.99
HmcesQ8R1M0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC27.5■■□□□ 1.99
HmcesQ8R1M0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
HmcesQ8R1M0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC27.5■■□□□ 1.99
HmcesQ8R1M0 Gm9847-201ENSMUST00000052528 599 ntBASIC27.5■■□□□ 1.99
HmcesQ8R1M0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
HmcesQ8R1M0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
HmcesQ8R1M0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
HmcesQ8R1M0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
HmcesQ8R1M0 Gm28536-201ENSMUST00000190971 1317 ntBASIC27.49■■□□□ 1.99
HmcesQ8R1M0 Gm22238-201ENSMUST00000175222 88 ntBASIC27.49■■□□□ 1.99
HmcesQ8R1M0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
HmcesQ8R1M0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
HmcesQ8R1M0 Gm21956-201ENSMUST00000179946 522 ntBASIC27.48■■□□□ 1.99
HmcesQ8R1M0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC27.48■■□□□ 1.99
HmcesQ8R1M0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
HmcesQ8R1M0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
HmcesQ8R1M0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
HmcesQ8R1M0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
HmcesQ8R1M0 Gm40881-201ENSMUST00000223397 166 ntBASIC27.46■■□□□ 1.99
HmcesQ8R1M0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
HmcesQ8R1M0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC27.45■■□□□ 1.98
HmcesQ8R1M0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
HmcesQ8R1M0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
HmcesQ8R1M0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
HmcesQ8R1M0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
HmcesQ8R1M0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
HmcesQ8R1M0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
HmcesQ8R1M0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
HmcesQ8R1M0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
HmcesQ8R1M0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC27.43■■□□□ 1.98
HmcesQ8R1M0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
HmcesQ8R1M0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
HmcesQ8R1M0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
HmcesQ8R1M0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
HmcesQ8R1M0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
HmcesQ8R1M0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC27.42■■□□□ 1.98
HmcesQ8R1M0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
HmcesQ8R1M0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC27.41■■□□□ 1.98
HmcesQ8R1M0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
HmcesQ8R1M0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
HmcesQ8R1M0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC27.4■■□□□ 1.98
HmcesQ8R1M0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
HmcesQ8R1M0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC27.4■■□□□ 1.98
HmcesQ8R1M0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
HmcesQ8R1M0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
HmcesQ8R1M0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC27.39■■□□□ 1.98
HmcesQ8R1M0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
HmcesQ8R1M0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
HmcesQ8R1M0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC27.38■■□□□ 1.97
HmcesQ8R1M0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC27.38■■□□□ 1.97
HmcesQ8R1M0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
HmcesQ8R1M0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC27.37■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms