Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rfwd3Q8CIK8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rfwd3Q8CIK8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfwd3Q8CIK8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfwd3Q8CIK8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
Rfwd3Q8CIK8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rfwd3Q8CIK8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rfwd3Q8CIK8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfwd3Q8CIK8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfwd3Q8CIK8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Rfwd3Q8CIK8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rfwd3Q8CIK8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rfwd3Q8CIK8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rfwd3Q8CIK8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rfwd3Q8CIK8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfwd3Q8CIK8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rfwd3Q8CIK8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rfwd3Q8CIK8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rfwd3Q8CIK8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfwd3Q8CIK8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rfwd3Q8CIK8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rfwd3Q8CIK8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Rfwd3Q8CIK8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.49■□□□□ 0.87
Rfwd3Q8CIK8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Rfwd3Q8CIK8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfwd3Q8CIK8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rfwd3Q8CIK8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Rfwd3Q8CIK8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfwd3Q8CIK8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfwd3Q8CIK8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rfwd3Q8CIK8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfwd3Q8CIK8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfwd3Q8CIK8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Rfwd3Q8CIK8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfwd3Q8CIK8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rfwd3Q8CIK8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rfwd3Q8CIK8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfwd3Q8CIK8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfwd3Q8CIK8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rfwd3Q8CIK8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.46■□□□□ 0.87
Rfwd3Q8CIK8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Rfwd3Q8CIK8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Rfwd3Q8CIK8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfwd3Q8CIK8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rfwd3Q8CIK8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfwd3Q8CIK8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
Rfwd3Q8CIK8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rfwd3Q8CIK8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfwd3Q8CIK8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Rfwd3Q8CIK8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfwd3Q8CIK8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Rfwd3Q8CIK8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfwd3Q8CIK8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rfwd3Q8CIK8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfwd3Q8CIK8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.43■□□□□ 0.86
Rfwd3Q8CIK8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rfwd3Q8CIK8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfwd3Q8CIK8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rfwd3Q8CIK8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.42■□□□□ 0.86
Rfwd3Q8CIK8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.42■□□□□ 0.86
Rfwd3Q8CIK8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rfwd3Q8CIK8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.42■□□□□ 0.86
Rfwd3Q8CIK8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rfwd3Q8CIK8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfwd3Q8CIK8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfwd3Q8CIK8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfwd3Q8CIK8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfwd3Q8CIK8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.41■□□□□ 0.86
Rfwd3Q8CIK8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rfwd3Q8CIK8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.41■□□□□ 0.86
Rfwd3Q8CIK8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfwd3Q8CIK8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfwd3Q8CIK8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rfwd3Q8CIK8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rfwd3Q8CIK8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfwd3Q8CIK8 Gm10420-201ENSMUST00000121713 882 ntBASIC20.39■□□□□ 0.85
Rfwd3Q8CIK8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rfwd3Q8CIK8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rfwd3Q8CIK8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rfwd3Q8CIK8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfwd3Q8CIK8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfwd3Q8CIK8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfwd3Q8CIK8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Rfwd3Q8CIK8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfwd3Q8CIK8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfwd3Q8CIK8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfwd3Q8CIK8 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.38■□□□□ 0.85
Rfwd3Q8CIK8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfwd3Q8CIK8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.37■□□□□ 0.85
Rfwd3Q8CIK8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfwd3Q8CIK8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfwd3Q8CIK8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfwd3Q8CIK8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rfwd3Q8CIK8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.37■□□□□ 0.85
Rfwd3Q8CIK8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfwd3Q8CIK8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfwd3Q8CIK8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfwd3Q8CIK8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.36■□□□□ 0.85
Rfwd3Q8CIK8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfwd3Q8CIK8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms