Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Smc4Q8CG47 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Smc4Q8CG47 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Smc4Q8CG47 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Smc4Q8CG47 Gm15546-201ENSMUST00000122095 826 ntBASIC27.17■■□□□ 1.94
Smc4Q8CG47 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC27.17■■□□□ 1.94
Smc4Q8CG47 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Smc4Q8CG47 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Smc4Q8CG47 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Smc4Q8CG47 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Smc4Q8CG47 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC27.16■■□□□ 1.94
Smc4Q8CG47 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Smc4Q8CG47 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Smc4Q8CG47 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
Smc4Q8CG47 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Smc4Q8CG47 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC27.14■■□□□ 1.93
Smc4Q8CG47 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC27.13■■□□□ 1.93
Smc4Q8CG47 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
Smc4Q8CG47 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Smc4Q8CG47 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
Smc4Q8CG47 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Smc4Q8CG47 Gm5522-201ENSMUST00000189483 1242 ntBASIC27.12■■□□□ 1.93
Smc4Q8CG47 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
Smc4Q8CG47 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC27.11■■□□□ 1.93
Smc4Q8CG47 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Smc4Q8CG47 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Smc4Q8CG47 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Smc4Q8CG47 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
Smc4Q8CG47 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC27.1■■□□□ 1.93
Smc4Q8CG47 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Smc4Q8CG47 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
Smc4Q8CG47 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC27.09■■□□□ 1.93
Smc4Q8CG47 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC27.09■■□□□ 1.93
Smc4Q8CG47 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
Smc4Q8CG47 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Smc4Q8CG47 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC27.08■■□□□ 1.93
Smc4Q8CG47 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Smc4Q8CG47 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Smc4Q8CG47 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Smc4Q8CG47 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC27.07■■□□□ 1.92
Smc4Q8CG47 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Smc4Q8CG47 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Smc4Q8CG47 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
Smc4Q8CG47 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Smc4Q8CG47 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Smc4Q8CG47 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Smc4Q8CG47 Gm28731-201ENSMUST00000185564 1569 ntBASIC27.06■■□□□ 1.92
Smc4Q8CG47 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Smc4Q8CG47 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Smc4Q8CG47 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
Smc4Q8CG47 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Smc4Q8CG47 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Smc4Q8CG47 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC27.05■■□□□ 1.92
Smc4Q8CG47 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Smc4Q8CG47 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Smc4Q8CG47 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Smc4Q8CG47 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Smc4Q8CG47 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC27.04■■□□□ 1.92
Smc4Q8CG47 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
Smc4Q8CG47 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC27.04■■□□□ 1.92
Smc4Q8CG47 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC27.04■■□□□ 1.92
Smc4Q8CG47 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
Smc4Q8CG47 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Smc4Q8CG47 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Smc4Q8CG47 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Smc4Q8CG47 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
Smc4Q8CG47 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Smc4Q8CG47 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Smc4Q8CG47 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
Smc4Q8CG47 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Smc4Q8CG47 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Smc4Q8CG47 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Smc4Q8CG47 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
Smc4Q8CG47 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC27.02■■□□□ 1.92
Smc4Q8CG47 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Smc4Q8CG47 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Smc4Q8CG47 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
Smc4Q8CG47 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
Smc4Q8CG47 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC27.01■■□□□ 1.91
Smc4Q8CG47 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Smc4Q8CG47 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Smc4Q8CG47 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
Smc4Q8CG47 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Smc4Q8CG47 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC27■■□□□ 1.91
Smc4Q8CG47 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Smc4Q8CG47 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC26.99■■□□□ 1.91
Smc4Q8CG47 AC117245.4-201ENSMUST00000217388 1646 ntBASIC26.99■■□□□ 1.91
Smc4Q8CG47 Gm15820-201ENSMUST00000201566 728 ntBASIC26.99■■□□□ 1.91
Smc4Q8CG47 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Smc4Q8CG47 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC26.98■■□□□ 1.91
Smc4Q8CG47 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Smc4Q8CG47 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
Smc4Q8CG47 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Smc4Q8CG47 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Smc4Q8CG47 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Smc4Q8CG47 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Smc4Q8CG47 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Smc4Q8CG47 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Smc4Q8CG47 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
Smc4Q8CG47 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC26.96■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms