Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Smc5Q8CG46 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Smc5Q8CG46 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Smc5Q8CG46 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Smc5Q8CG46 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Smc5Q8CG46 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC27.35■■□□□ 1.97
Smc5Q8CG46 Gm9910-201ENSMUST00000195385 1550 ntBASIC27.35■■□□□ 1.97
Smc5Q8CG46 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Smc5Q8CG46 AC153524.1-201ENSMUST00000220436 1935 ntBASIC27.35■■□□□ 1.97
Smc5Q8CG46 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC27.35■■□□□ 1.97
Smc5Q8CG46 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Smc5Q8CG46 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Smc5Q8CG46 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC27.34■■□□□ 1.97
Smc5Q8CG46 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Smc5Q8CG46 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Smc5Q8CG46 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Smc5Q8CG46 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Smc5Q8CG46 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Smc5Q8CG46 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
Smc5Q8CG46 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Smc5Q8CG46 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Smc5Q8CG46 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Smc5Q8CG46 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
Smc5Q8CG46 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
Smc5Q8CG46 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Smc5Q8CG46 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
Smc5Q8CG46 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Smc5Q8CG46 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Smc5Q8CG46 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Smc5Q8CG46 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Smc5Q8CG46 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Smc5Q8CG46 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
Smc5Q8CG46 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
Smc5Q8CG46 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC27.3■■□□□ 1.96
Smc5Q8CG46 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Smc5Q8CG46 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Smc5Q8CG46 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Smc5Q8CG46 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC27.27■■□□□ 1.96
Smc5Q8CG46 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Smc5Q8CG46 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC27.27■■□□□ 1.96
Smc5Q8CG46 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.27■■□□□ 1.96
Smc5Q8CG46 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Smc5Q8CG46 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Smc5Q8CG46 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Smc5Q8CG46 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Smc5Q8CG46 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Smc5Q8CG46 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Smc5Q8CG46 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Smc5Q8CG46 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Smc5Q8CG46 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Smc5Q8CG46 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Smc5Q8CG46 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC27.24■■□□□ 1.95
Smc5Q8CG46 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Smc5Q8CG46 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC27.24■■□□□ 1.95
Smc5Q8CG46 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Smc5Q8CG46 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Smc5Q8CG46 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC27.23■■□□□ 1.95
Smc5Q8CG46 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC27.23■■□□□ 1.95
Smc5Q8CG46 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Smc5Q8CG46 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Smc5Q8CG46 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Smc5Q8CG46 AC117245.4-201ENSMUST00000217388 1646 ntBASIC27.23■■□□□ 1.95
Smc5Q8CG46 Gm38160-201ENSMUST00000193090 2499 ntBASIC27.22■■□□□ 1.95
Smc5Q8CG46 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Smc5Q8CG46 Gm7432-201ENSMUST00000210343 879 ntBASIC27.22■■□□□ 1.95
Smc5Q8CG46 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
Smc5Q8CG46 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Smc5Q8CG46 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Smc5Q8CG46 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Smc5Q8CG46 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Smc5Q8CG46 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Smc5Q8CG46 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
Smc5Q8CG46 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Smc5Q8CG46 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.95
Smc5Q8CG46 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC27.2■■□□□ 1.95
Smc5Q8CG46 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Smc5Q8CG46 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Smc5Q8CG46 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC27.2■■□□□ 1.94
Smc5Q8CG46 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Smc5Q8CG46 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Smc5Q8CG46 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC27.18■■□□□ 1.94
Smc5Q8CG46 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC27.18■■□□□ 1.94
Smc5Q8CG46 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Smc5Q8CG46 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Smc5Q8CG46 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Smc5Q8CG46 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Smc5Q8CG46 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
Smc5Q8CG46 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Smc5Q8CG46 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Smc5Q8CG46 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC27.17■■□□□ 1.94
Smc5Q8CG46 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Smc5Q8CG46 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
Smc5Q8CG46 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Smc5Q8CG46 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Smc5Q8CG46 Gm11599-201ENSMUST00000118720 878 ntBASIC27.16■■□□□ 1.94
Smc5Q8CG46 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Smc5Q8CG46 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Smc5Q8CG46 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Smc5Q8CG46 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Smc5Q8CG46 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 116.9 ms