Protein–RNA interactions for Protein: Q8CE50

Snx30, Sorting nexin-30, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx30Q8CE50 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Snx30Q8CE50 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Snx30Q8CE50 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.51■■□□□ 1.19
Snx30Q8CE50 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Snx30Q8CE50 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Snx30Q8CE50 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Snx30Q8CE50 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Snx30Q8CE50 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
Snx30Q8CE50 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.5■■□□□ 1.19
Snx30Q8CE50 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.5■■□□□ 1.19
Snx30Q8CE50 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Snx30Q8CE50 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Snx30Q8CE50 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Snx30Q8CE50 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Snx30Q8CE50 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Snx30Q8CE50 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Snx30Q8CE50 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Snx30Q8CE50 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Snx30Q8CE50 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Snx30Q8CE50 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Snx30Q8CE50 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
Snx30Q8CE50 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Snx30Q8CE50 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Snx30Q8CE50 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Snx30Q8CE50 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Snx30Q8CE50 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.48■■□□□ 1.19
Snx30Q8CE50 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Snx30Q8CE50 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Snx30Q8CE50 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Snx30Q8CE50 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.48■■□□□ 1.19
Snx30Q8CE50 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Snx30Q8CE50 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Snx30Q8CE50 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Snx30Q8CE50 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Snx30Q8CE50 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Snx30Q8CE50 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Snx30Q8CE50 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.46■■□□□ 1.19
Snx30Q8CE50 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Snx30Q8CE50 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Snx30Q8CE50 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Snx30Q8CE50 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Snx30Q8CE50 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
Snx30Q8CE50 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Snx30Q8CE50 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Snx30Q8CE50 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Snx30Q8CE50 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Snx30Q8CE50 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Snx30Q8CE50 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Snx30Q8CE50 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.44■■□□□ 1.18
Snx30Q8CE50 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Snx30Q8CE50 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.44■■□□□ 1.18
Snx30Q8CE50 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
Snx30Q8CE50 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Snx30Q8CE50 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Snx30Q8CE50 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.43■■□□□ 1.18
Snx30Q8CE50 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Snx30Q8CE50 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Snx30Q8CE50 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Snx30Q8CE50 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Snx30Q8CE50 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Snx30Q8CE50 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Snx30Q8CE50 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Snx30Q8CE50 Gm14523-201ENSMUST00000117260 558 ntBASIC22.42■■□□□ 1.18
Snx30Q8CE50 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.42■■□□□ 1.18
Snx30Q8CE50 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Snx30Q8CE50 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Snx30Q8CE50 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Snx30Q8CE50 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Snx30Q8CE50 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Snx30Q8CE50 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Snx30Q8CE50 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Snx30Q8CE50 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Snx30Q8CE50 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Snx30Q8CE50 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Snx30Q8CE50 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Snx30Q8CE50 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Snx30Q8CE50 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
Snx30Q8CE50 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Snx30Q8CE50 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.4■■□□□ 1.18
Snx30Q8CE50 Gm12366-201ENSMUST00000121722 873 ntBASIC22.4■■□□□ 1.18
Snx30Q8CE50 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.4■■□□□ 1.18
Snx30Q8CE50 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.4■■□□□ 1.18
Snx30Q8CE50 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.4■■□□□ 1.18
Snx30Q8CE50 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Snx30Q8CE50 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.4■■□□□ 1.18
Snx30Q8CE50 Gm5786-201ENSMUST00000085368 882 ntBASIC22.4■■□□□ 1.18
Snx30Q8CE50 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Snx30Q8CE50 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Snx30Q8CE50 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Snx30Q8CE50 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Snx30Q8CE50 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.39■■□□□ 1.17
Snx30Q8CE50 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Snx30Q8CE50 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Snx30Q8CE50 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Snx30Q8CE50 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.38■■□□□ 1.17
Snx30Q8CE50 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Snx30Q8CE50 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Snx30Q8CE50 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Snx30Q8CE50 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.37■■□□□ 1.17
Snx30Q8CE50 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms