Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rtp1Q8C8C1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rtp1Q8C8C1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rtp1Q8C8C1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rtp1Q8C8C1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Rtp1Q8C8C1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rtp1Q8C8C1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rtp1Q8C8C1 Gm16464-201ENSMUST00000117815 1095 ntBASIC25.51■■□□□ 1.67
Rtp1Q8C8C1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Rtp1Q8C8C1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Rtp1Q8C8C1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rtp1Q8C8C1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rtp1Q8C8C1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC25.5■■□□□ 1.67
Rtp1Q8C8C1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rtp1Q8C8C1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rtp1Q8C8C1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rtp1Q8C8C1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rtp1Q8C8C1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rtp1Q8C8C1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rtp1Q8C8C1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC25.49■■□□□ 1.67
Rtp1Q8C8C1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rtp1Q8C8C1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rtp1Q8C8C1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
Rtp1Q8C8C1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rtp1Q8C8C1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Rtp1Q8C8C1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC25.47■■□□□ 1.67
Rtp1Q8C8C1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rtp1Q8C8C1 Gm22238-201ENSMUST00000175222 88 ntBASIC25.46■■□□□ 1.67
Rtp1Q8C8C1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rtp1Q8C8C1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Rtp1Q8C8C1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
Rtp1Q8C8C1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Rtp1Q8C8C1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Rtp1Q8C8C1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Rtp1Q8C8C1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rtp1Q8C8C1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC25.44■■□□□ 1.66
Rtp1Q8C8C1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rtp1Q8C8C1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rtp1Q8C8C1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Rtp1Q8C8C1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rtp1Q8C8C1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Rtp1Q8C8C1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rtp1Q8C8C1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC25.43■■□□□ 1.66
Rtp1Q8C8C1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rtp1Q8C8C1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Rtp1Q8C8C1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Rtp1Q8C8C1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC25.41■■□□□ 1.66
Rtp1Q8C8C1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC25.41■■□□□ 1.66
Rtp1Q8C8C1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rtp1Q8C8C1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rtp1Q8C8C1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Rtp1Q8C8C1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC25.4■■□□□ 1.66
Rtp1Q8C8C1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.4■■□□□ 1.66
Rtp1Q8C8C1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rtp1Q8C8C1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Rtp1Q8C8C1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC25.39■■□□□ 1.66
Rtp1Q8C8C1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC25.39■■□□□ 1.66
Rtp1Q8C8C1 Appbp2os-202ENSMUST00000206972 447 ntBASIC25.39■■□□□ 1.66
Rtp1Q8C8C1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Rtp1Q8C8C1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Rtp1Q8C8C1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Rtp1Q8C8C1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rtp1Q8C8C1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rtp1Q8C8C1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rtp1Q8C8C1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC25.37■■□□□ 1.65
Rtp1Q8C8C1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rtp1Q8C8C1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rtp1Q8C8C1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC25.37■■□□□ 1.65
Rtp1Q8C8C1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rtp1Q8C8C1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Rtp1Q8C8C1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Rtp1Q8C8C1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC25.36■■□□□ 1.65
Rtp1Q8C8C1 AC140930.3-201ENSMUST00000222935 274 ntBASIC25.36■■□□□ 1.65
Rtp1Q8C8C1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rtp1Q8C8C1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rtp1Q8C8C1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
Rtp1Q8C8C1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rtp1Q8C8C1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC25.35■■□□□ 1.65
Rtp1Q8C8C1 Slc35b2-207ENSMUST00000226086 850 ntBASIC25.35■■□□□ 1.65
Rtp1Q8C8C1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rtp1Q8C8C1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rtp1Q8C8C1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rtp1Q8C8C1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
Rtp1Q8C8C1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Rtp1Q8C8C1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Rtp1Q8C8C1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rtp1Q8C8C1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.32■■□□□ 1.64
Rtp1Q8C8C1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Rtp1Q8C8C1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rtp1Q8C8C1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rtp1Q8C8C1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC25.31■■□□□ 1.64
Rtp1Q8C8C1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC25.31■■□□□ 1.64
Rtp1Q8C8C1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.3■■□□□ 1.64
Rtp1Q8C8C1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC25.3■■□□□ 1.64
Rtp1Q8C8C1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.3■■□□□ 1.64
Rtp1Q8C8C1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Rtp1Q8C8C1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rtp1Q8C8C1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rtp1Q8C8C1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rtp1Q8C8C1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC25.29■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms