Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rfx6Q8C7R7 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.24■■□□□ 1.15
Rfx6Q8C7R7 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rfx6Q8C7R7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.24■■□□□ 1.15
Rfx6Q8C7R7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rfx6Q8C7R7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.23■■□□□ 1.15
Rfx6Q8C7R7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rfx6Q8C7R7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Rfx6Q8C7R7 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Rfx6Q8C7R7 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.23■■□□□ 1.15
Rfx6Q8C7R7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rfx6Q8C7R7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
Rfx6Q8C7R7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rfx6Q8C7R7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rfx6Q8C7R7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.22■■□□□ 1.15
Rfx6Q8C7R7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rfx6Q8C7R7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rfx6Q8C7R7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Rfx6Q8C7R7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.21■■□□□ 1.15
Rfx6Q8C7R7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Rfx6Q8C7R7 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rfx6Q8C7R7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Rfx6Q8C7R7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Rfx6Q8C7R7 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Rfx6Q8C7R7 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Rfx6Q8C7R7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rfx6Q8C7R7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rfx6Q8C7R7 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.2■■□□□ 1.14
Rfx6Q8C7R7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rfx6Q8C7R7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rfx6Q8C7R7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Rfx6Q8C7R7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rfx6Q8C7R7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rfx6Q8C7R7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.19■■□□□ 1.14
Rfx6Q8C7R7 Gm45364-201ENSMUST00000210883 159 ntBASIC22.19■■□□□ 1.14
Rfx6Q8C7R7 Terc-201ENSMUST00000082862 423 ntBASIC22.19■■□□□ 1.14
Rfx6Q8C7R7 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.18■■□□□ 1.14
Rfx6Q8C7R7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Rfx6Q8C7R7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Rfx6Q8C7R7 Gm7432-201ENSMUST00000210343 879 ntBASIC22.18■■□□□ 1.14
Rfx6Q8C7R7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rfx6Q8C7R7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rfx6Q8C7R7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rfx6Q8C7R7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rfx6Q8C7R7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rfx6Q8C7R7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rfx6Q8C7R7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rfx6Q8C7R7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rfx6Q8C7R7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rfx6Q8C7R7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rfx6Q8C7R7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.16■■□□□ 1.14
Rfx6Q8C7R7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
Rfx6Q8C7R7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rfx6Q8C7R7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rfx6Q8C7R7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rfx6Q8C7R7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rfx6Q8C7R7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rfx6Q8C7R7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Rfx6Q8C7R7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rfx6Q8C7R7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Rfx6Q8C7R7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
Rfx6Q8C7R7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rfx6Q8C7R7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rfx6Q8C7R7 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.13■■□□□ 1.13
Rfx6Q8C7R7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rfx6Q8C7R7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Rfx6Q8C7R7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rfx6Q8C7R7 Gm11599-201ENSMUST00000118720 878 ntBASIC22.12■■□□□ 1.13
Rfx6Q8C7R7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.12■■□□□ 1.13
Rfx6Q8C7R7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rfx6Q8C7R7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rfx6Q8C7R7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rfx6Q8C7R7 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rfx6Q8C7R7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Rfx6Q8C7R7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.11■■□□□ 1.13
Rfx6Q8C7R7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rfx6Q8C7R7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rfx6Q8C7R7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Rfx6Q8C7R7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rfx6Q8C7R7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rfx6Q8C7R7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Rfx6Q8C7R7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rfx6Q8C7R7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Rfx6Q8C7R7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.09■■□□□ 1.13
Rfx6Q8C7R7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.09■■□□□ 1.13
Rfx6Q8C7R7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Rfx6Q8C7R7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rfx6Q8C7R7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rfx6Q8C7R7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Rfx6Q8C7R7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.08■■□□□ 1.12
Rfx6Q8C7R7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC22.08■■□□□ 1.12
Rfx6Q8C7R7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Rfx6Q8C7R7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rfx6Q8C7R7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rfx6Q8C7R7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Rfx6Q8C7R7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rfx6Q8C7R7 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.07■■□□□ 1.12
Rfx6Q8C7R7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC22.06■■□□□ 1.12
Rfx6Q8C7R7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rfx6Q8C7R7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms