Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Cps1Q8C196 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cps1Q8C196 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Cps1Q8C196 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Cps1Q8C196 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Cps1Q8C196 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Cps1Q8C196 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Cps1Q8C196 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
Cps1Q8C196 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC30.57■■■□□ 2.49
Cps1Q8C196 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC30.57■■■□□ 2.49
Cps1Q8C196 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC30.57■■■□□ 2.49
Cps1Q8C196 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC30.57■■■□□ 2.49
Cps1Q8C196 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.49
Cps1Q8C196 AC122428.3-201ENSMUST00000215551 2290 ntBASIC30.57■■■□□ 2.48
Cps1Q8C196 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC30.57■■■□□ 2.48
Cps1Q8C196 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Cps1Q8C196 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Cps1Q8C196 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC30.57■■■□□ 2.48
Cps1Q8C196 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Cps1Q8C196 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Cps1Q8C196 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Cps1Q8C196 Nsd1-206ENSMUST00000224918 1001 ntBASIC30.56■■■□□ 2.48
Cps1Q8C196 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC30.55■■■□□ 2.48
Cps1Q8C196 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Cps1Q8C196 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Cps1Q8C196 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC30.54■■■□□ 2.48
Cps1Q8C196 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC30.54■■■□□ 2.48
Cps1Q8C196 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Cps1Q8C196 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC30.54■■■□□ 2.48
Cps1Q8C196 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Cps1Q8C196 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
Cps1Q8C196 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Cps1Q8C196 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Cps1Q8C196 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC30.52■■■□□ 2.48
Cps1Q8C196 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC30.51■■■□□ 2.47
Cps1Q8C196 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.47
Cps1Q8C196 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Cps1Q8C196 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Cps1Q8C196 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC30.5■■■□□ 2.47
Cps1Q8C196 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC30.5■■■□□ 2.47
Cps1Q8C196 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Cps1Q8C196 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Cps1Q8C196 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
Cps1Q8C196 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Cps1Q8C196 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Cps1Q8C196 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Cps1Q8C196 Gm21956-201ENSMUST00000179946 522 ntBASIC30.48■■■□□ 2.47
Cps1Q8C196 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Cps1Q8C196 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Cps1Q8C196 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Cps1Q8C196 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC30.47■■■□□ 2.47
Cps1Q8C196 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC30.47■■■□□ 2.47
Cps1Q8C196 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Cps1Q8C196 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Cps1Q8C196 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Cps1Q8C196 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC30.45■■■□□ 2.46
Cps1Q8C196 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC30.45■■■□□ 2.46
Cps1Q8C196 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Cps1Q8C196 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Cps1Q8C196 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC30.44■■■□□ 2.46
Cps1Q8C196 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
Cps1Q8C196 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
Cps1Q8C196 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Cps1Q8C196 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Cps1Q8C196 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC30.43■■■□□ 2.46
Cps1Q8C196 Gm22238-201ENSMUST00000175222 88 ntBASIC30.43■■■□□ 2.46
Cps1Q8C196 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Cps1Q8C196 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Cps1Q8C196 Gm13241-201ENSMUST00000094493 780 ntBASIC30.42■■■□□ 2.46
Cps1Q8C196 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Cps1Q8C196 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
Cps1Q8C196 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC30.42■■■□□ 2.46
Cps1Q8C196 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC30.42■■■□□ 2.46
Cps1Q8C196 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Cps1Q8C196 Gm7417-201ENSMUST00000192950 473 ntBASIC30.41■■■□□ 2.46
Cps1Q8C196 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
Cps1Q8C196 Gm40881-201ENSMUST00000223397 166 ntBASIC30.4■■■□□ 2.46
Cps1Q8C196 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Cps1Q8C196 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
Cps1Q8C196 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
Cps1Q8C196 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC30.38■■■□□ 2.45
Cps1Q8C196 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Cps1Q8C196 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Cps1Q8C196 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
Cps1Q8C196 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Cps1Q8C196 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
Cps1Q8C196 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Cps1Q8C196 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Cps1Q8C196 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
Cps1Q8C196 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Cps1Q8C196 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Cps1Q8C196 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC30.37■■■□□ 2.45
Cps1Q8C196 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Cps1Q8C196 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
Cps1Q8C196 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Cps1Q8C196 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Cps1Q8C196 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Cps1Q8C196 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC30.35■■■□□ 2.45
Cps1Q8C196 Gm28536-201ENSMUST00000190971 1317 ntBASIC30.35■■■□□ 2.45
Cps1Q8C196 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC30.35■■■□□ 2.45
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms