Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Ube3dQ8BX13 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3dQ8BX13 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.41■□□□□ 0.7
Ube3dQ8BX13 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube3dQ8BX13 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.41■□□□□ 0.7
Ube3dQ8BX13 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3dQ8BX13 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.4■□□□□ 0.7
Ube3dQ8BX13 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3dQ8BX13 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.4■□□□□ 0.7
Ube3dQ8BX13 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.4■□□□□ 0.7
Ube3dQ8BX13 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3dQ8BX13 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Ube3dQ8BX13 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3dQ8BX13 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
Ube3dQ8BX13 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3dQ8BX13 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ube3dQ8BX13 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube3dQ8BX13 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.39■□□□□ 0.7
Ube3dQ8BX13 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3dQ8BX13 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Ube3dQ8BX13 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3dQ8BX13 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube3dQ8BX13 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3dQ8BX13 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3dQ8BX13 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3dQ8BX13 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube3dQ8BX13 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ube3dQ8BX13 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ube3dQ8BX13 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ube3dQ8BX13 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ube3dQ8BX13 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Ube3dQ8BX13 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.37■□□□□ 0.69
Ube3dQ8BX13 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ube3dQ8BX13 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.37■□□□□ 0.69
Ube3dQ8BX13 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3dQ8BX13 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3dQ8BX13 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.36■□□□□ 0.69
Ube3dQ8BX13 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3dQ8BX13 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.36■□□□□ 0.69
Ube3dQ8BX13 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.36■□□□□ 0.69
Ube3dQ8BX13 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3dQ8BX13 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3dQ8BX13 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3dQ8BX13 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3dQ8BX13 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3dQ8BX13 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3dQ8BX13 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Ube3dQ8BX13 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ube3dQ8BX13 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.34■□□□□ 0.69
Ube3dQ8BX13 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3dQ8BX13 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3dQ8BX13 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3dQ8BX13 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ube3dQ8BX13 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ube3dQ8BX13 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.33■□□□□ 0.69
Ube3dQ8BX13 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Ube3dQ8BX13 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3dQ8BX13 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3dQ8BX13 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.32■□□□□ 0.68
Ube3dQ8BX13 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3dQ8BX13 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3dQ8BX13 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ube3dQ8BX13 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ube3dQ8BX13 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.31■□□□□ 0.68
Ube3dQ8BX13 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ube3dQ8BX13 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.31■□□□□ 0.68
Ube3dQ8BX13 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ube3dQ8BX13 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ube3dQ8BX13 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube3dQ8BX13 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ube3dQ8BX13 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube3dQ8BX13 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube3dQ8BX13 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube3dQ8BX13 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube3dQ8BX13 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube3dQ8BX13 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.29■□□□□ 0.68
Ube3dQ8BX13 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube3dQ8BX13 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube3dQ8BX13 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube3dQ8BX13 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube3dQ8BX13 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ube3dQ8BX13 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube3dQ8BX13 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube3dQ8BX13 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ube3dQ8BX13 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube3dQ8BX13 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube3dQ8BX13 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ube3dQ8BX13 Gm44428-201ENSMUST00000204474 874 ntBASIC19.28■□□□□ 0.68
Ube3dQ8BX13 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Ube3dQ8BX13 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube3dQ8BX13 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube3dQ8BX13 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube3dQ8BX13 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ube3dQ8BX13 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube3dQ8BX13 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ube3dQ8BX13 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ube3dQ8BX13 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ube3dQ8BX13 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ube3dQ8BX13 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Ube3dQ8BX13 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms