Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdk5rap1Q8BTW8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdk5rap1Q8BTW8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdk5rap1Q8BTW8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdk5rap1Q8BTW8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdk5rap1Q8BTW8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdk5rap1Q8BTW8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cdk5rap1Q8BTW8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.85■□□□□ 0.93
Cdk5rap1Q8BTW8 Gm15546-201ENSMUST00000122095 826 ntBASIC20.85■□□□□ 0.93
Cdk5rap1Q8BTW8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cdk5rap1Q8BTW8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdk5rap1Q8BTW8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdk5rap1Q8BTW8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdk5rap1Q8BTW8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cdk5rap1Q8BTW8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdk5rap1Q8BTW8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cdk5rap1Q8BTW8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cdk5rap1Q8BTW8 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.83■□□□□ 0.93
Cdk5rap1Q8BTW8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.83■□□□□ 0.93
Cdk5rap1Q8BTW8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cdk5rap1Q8BTW8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.82■□□□□ 0.92
Cdk5rap1Q8BTW8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdk5rap1Q8BTW8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdk5rap1Q8BTW8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdk5rap1Q8BTW8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cdk5rap1Q8BTW8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdk5rap1Q8BTW8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cdk5rap1Q8BTW8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdk5rap1Q8BTW8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Cdk5rap1Q8BTW8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdk5rap1Q8BTW8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Cdk5rap1Q8BTW8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdk5rap1Q8BTW8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdk5rap1Q8BTW8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.8■□□□□ 0.92
Cdk5rap1Q8BTW8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.8■□□□□ 0.92
Cdk5rap1Q8BTW8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdk5rap1Q8BTW8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk5rap1Q8BTW8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk5rap1Q8BTW8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk5rap1Q8BTW8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk5rap1Q8BTW8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.79■□□□□ 0.92
Cdk5rap1Q8BTW8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.79■□□□□ 0.92
Cdk5rap1Q8BTW8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.78■□□□□ 0.92
Cdk5rap1Q8BTW8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cdk5rap1Q8BTW8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdk5rap1Q8BTW8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cdk5rap1Q8BTW8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdk5rap1Q8BTW8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdk5rap1Q8BTW8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdk5rap1Q8BTW8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cdk5rap1Q8BTW8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdk5rap1Q8BTW8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cdk5rap1Q8BTW8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cdk5rap1Q8BTW8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cdk5rap1Q8BTW8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cdk5rap1Q8BTW8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdk5rap1Q8BTW8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdk5rap1Q8BTW8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdk5rap1Q8BTW8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdk5rap1Q8BTW8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdk5rap1Q8BTW8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cdk5rap1Q8BTW8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Cdk5rap1Q8BTW8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.75■□□□□ 0.91
Cdk5rap1Q8BTW8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cdk5rap1Q8BTW8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.75■□□□□ 0.91
Cdk5rap1Q8BTW8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.75■□□□□ 0.91
Cdk5rap1Q8BTW8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdk5rap1Q8BTW8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdk5rap1Q8BTW8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cdk5rap1Q8BTW8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdk5rap1Q8BTW8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cdk5rap1Q8BTW8 Gm15820-201ENSMUST00000201566 728 ntBASIC20.74■□□□□ 0.91
Cdk5rap1Q8BTW8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdk5rap1Q8BTW8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdk5rap1Q8BTW8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk5rap1Q8BTW8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk5rap1Q8BTW8 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.73■□□□□ 0.91
Cdk5rap1Q8BTW8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk5rap1Q8BTW8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cdk5rap1Q8BTW8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk5rap1Q8BTW8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cdk5rap1Q8BTW8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cdk5rap1Q8BTW8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk5rap1Q8BTW8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Cdk5rap1Q8BTW8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cdk5rap1Q8BTW8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.72■□□□□ 0.91
Cdk5rap1Q8BTW8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.72■□□□□ 0.91
Cdk5rap1Q8BTW8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk5rap1Q8BTW8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk5rap1Q8BTW8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap1Q8BTW8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.71■□□□□ 0.91
Cdk5rap1Q8BTW8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Cdk5rap1Q8BTW8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.71■□□□□ 0.91
Cdk5rap1Q8BTW8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk5rap1Q8BTW8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk5rap1Q8BTW8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk5rap1Q8BTW8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Cdk5rap1Q8BTW8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk5rap1Q8BTW8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk5rap1Q8BTW8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms