Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Smco3Q8BQM7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smco3Q8BQM7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smco3Q8BQM7 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smco3Q8BQM7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.02■□□□□ 0.47
Smco3Q8BQM7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Smco3Q8BQM7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smco3Q8BQM7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smco3Q8BQM7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.01■□□□□ 0.47
Smco3Q8BQM7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Smco3Q8BQM7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smco3Q8BQM7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smco3Q8BQM7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smco3Q8BQM7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smco3Q8BQM7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Smco3Q8BQM7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18■□□□□ 0.47
Smco3Q8BQM7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smco3Q8BQM7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smco3Q8BQM7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smco3Q8BQM7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smco3Q8BQM7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smco3Q8BQM7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smco3Q8BQM7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smco3Q8BQM7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.98■□□□□ 0.47
Smco3Q8BQM7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Smco3Q8BQM7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Smco3Q8BQM7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smco3Q8BQM7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smco3Q8BQM7 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.98■□□□□ 0.47
Smco3Q8BQM7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smco3Q8BQM7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smco3Q8BQM7 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smco3Q8BQM7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smco3Q8BQM7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smco3Q8BQM7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Smco3Q8BQM7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Smco3Q8BQM7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smco3Q8BQM7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smco3Q8BQM7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smco3Q8BQM7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Smco3Q8BQM7 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.97■□□□□ 0.47
Smco3Q8BQM7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smco3Q8BQM7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Smco3Q8BQM7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smco3Q8BQM7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.96■□□□□ 0.47
Smco3Q8BQM7 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smco3Q8BQM7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smco3Q8BQM7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Smco3Q8BQM7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smco3Q8BQM7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smco3Q8BQM7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Smco3Q8BQM7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smco3Q8BQM7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smco3Q8BQM7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.94■□□□□ 0.46
Smco3Q8BQM7 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.94■□□□□ 0.46
Smco3Q8BQM7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smco3Q8BQM7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smco3Q8BQM7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Smco3Q8BQM7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smco3Q8BQM7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smco3Q8BQM7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smco3Q8BQM7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Smco3Q8BQM7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smco3Q8BQM7 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smco3Q8BQM7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smco3Q8BQM7 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.92■□□□□ 0.46
Smco3Q8BQM7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smco3Q8BQM7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smco3Q8BQM7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Smco3Q8BQM7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smco3Q8BQM7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smco3Q8BQM7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smco3Q8BQM7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smco3Q8BQM7 Gm45855-201ENSMUST00000212546 880 ntBASIC17.91■□□□□ 0.46
Smco3Q8BQM7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smco3Q8BQM7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Smco3Q8BQM7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smco3Q8BQM7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.91■□□□□ 0.46
Smco3Q8BQM7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smco3Q8BQM7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smco3Q8BQM7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Smco3Q8BQM7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smco3Q8BQM7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smco3Q8BQM7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.9■□□□□ 0.46
Smco3Q8BQM7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.9■□□□□ 0.46
Smco3Q8BQM7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smco3Q8BQM7 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.89■□□□□ 0.46
Smco3Q8BQM7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smco3Q8BQM7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Smco3Q8BQM7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Smco3Q8BQM7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smco3Q8BQM7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Smco3Q8BQM7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.89■□□□□ 0.45
Smco3Q8BQM7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smco3Q8BQM7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Smco3Q8BQM7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smco3Q8BQM7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Smco3Q8BQM7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smco3Q8BQM7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smco3Q8BQM7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms