Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdkl3Q8BLF2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdkl3Q8BLF2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdkl3Q8BLF2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdkl3Q8BLF2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdkl3Q8BLF2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdkl3Q8BLF2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdkl3Q8BLF2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdkl3Q8BLF2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdkl3Q8BLF2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdkl3Q8BLF2 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.88■□□□□ 0.61
Cdkl3Q8BLF2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdkl3Q8BLF2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdkl3Q8BLF2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdkl3Q8BLF2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdkl3Q8BLF2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cdkl3Q8BLF2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Cdkl3Q8BLF2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdkl3Q8BLF2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdkl3Q8BLF2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdkl3Q8BLF2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cdkl3Q8BLF2 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.86■□□□□ 0.61
Cdkl3Q8BLF2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdkl3Q8BLF2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Cdkl3Q8BLF2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkl3Q8BLF2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkl3Q8BLF2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkl3Q8BLF2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkl3Q8BLF2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkl3Q8BLF2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkl3Q8BLF2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
Cdkl3Q8BLF2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Cdkl3Q8BLF2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdkl3Q8BLF2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cdkl3Q8BLF2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdkl3Q8BLF2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkl3Q8BLF2 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.81■□□□□ 0.6
Cdkl3Q8BLF2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkl3Q8BLF2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cdkl3Q8BLF2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkl3Q8BLF2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkl3Q8BLF2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkl3Q8BLF2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkl3Q8BLF2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkl3Q8BLF2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkl3Q8BLF2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.8■□□□□ 0.6
Cdkl3Q8BLF2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkl3Q8BLF2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkl3Q8BLF2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cdkl3Q8BLF2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkl3Q8BLF2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkl3Q8BLF2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkl3Q8BLF2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.79■□□□□ 0.6
Cdkl3Q8BLF2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkl3Q8BLF2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkl3Q8BLF2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cdkl3Q8BLF2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Cdkl3Q8BLF2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkl3Q8BLF2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cdkl3Q8BLF2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkl3Q8BLF2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkl3Q8BLF2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkl3Q8BLF2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.78■□□□□ 0.6
Cdkl3Q8BLF2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cdkl3Q8BLF2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkl3Q8BLF2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkl3Q8BLF2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Cdkl3Q8BLF2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdkl3Q8BLF2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdkl3Q8BLF2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Cdkl3Q8BLF2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdkl3Q8BLF2 Zfp131-205ENSMUST00000223812 663 ntBASIC18.76■□□□□ 0.59
Cdkl3Q8BLF2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cdkl3Q8BLF2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdkl3Q8BLF2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdkl3Q8BLF2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.75■□□□□ 0.59
Cdkl3Q8BLF2 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.75■□□□□ 0.59
Cdkl3Q8BLF2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdkl3Q8BLF2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdkl3Q8BLF2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdkl3Q8BLF2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdkl3Q8BLF2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cdkl3Q8BLF2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Cdkl3Q8BLF2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.74■□□□□ 0.59
Cdkl3Q8BLF2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdkl3Q8BLF2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl3Q8BLF2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl3Q8BLF2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl3Q8BLF2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cdkl3Q8BLF2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl3Q8BLF2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl3Q8BLF2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.73■□□□□ 0.59
Cdkl3Q8BLF2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl3Q8BLF2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl3Q8BLF2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdkl3Q8BLF2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkl3Q8BLF2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkl3Q8BLF2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkl3Q8BLF2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdkl3Q8BLF2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms